RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CCPG1Q9ULG6 757 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 MRPL11Q9Y3B7 192 aaKnown RBP11.43□□□□□ -0.58
USP11-211ENST00000489111 PCDHB6Q9Y5E3 794 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 A0A1W2PQ27 194 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 A0A1W2PQ64 194 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 A0A1W2PQD8 194 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 CXCL11O14625 94 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 CUTAO60888 179 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 MCM7P33993 719 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 AP3B2Q13367 1082 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 ZNF174Q15697 407 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 LDLRAD1Q5T700 205 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 NEK8Q86SG6 692 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 C2orf69Q8N8R5 385 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 FSIP1Q8NA03 581 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 MRPS27Q92552 414 aaKnown RBP11.42□□□□□ -0.58
USP11-211ENST00000489111 OPTNQ96CV9 577 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 SLC10A4Q96EP9 437 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 GBA2Q9HCG7 927 aaPredicted RBP11.42□□□□□ -0.58
USP11-211ENST00000489111 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
USP11-211ENST00000489111 PCDHA7Q9UN72 937 aa11.42□□□□□ -0.58
USP11-211ENST00000489111 UTRNP46939 3433 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 MYPNQ86TC9 1320 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 SPDYE3A6NKU9 549 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 IRF6O14896 467 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 CELF2O95319 508 aaKnown RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 FOSP01100 380 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 TAL1P17542 331 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 ORC2Q13416 577 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 COG2Q14746 738 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 LETM2Q2VYF4 491 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 CCDC183Q5T5S1 534 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 ADALQ6DHV7 355 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 ATG4CQ96DT6 458 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 EHMT1Q9H9B1 1298 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 SLC38A10Q9HBR0 1119 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
USP11-211ENST00000489111 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
USP11-211ENST00000489111 GCOM1H8Y6P7 765 aaPredicted RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 VWA5AO00534 786 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 CCNT1O60563 726 aaKnown RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 POLR2MP0CAP2 368 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 DSG3P32926 999 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 CLK2P49760 499 aaKnown RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 IRX3P78415 501 aaPredicted RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 FMR1Q06787 632 aaKnown RBP eCLIP11.4□□□□□ -0.58
USP11-211ENST00000489111 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.58
USP11-211ENST00000489111 SNAPC2Q13487 334 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 USP17L6PQ6QN14 398 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 CATSPERGQ6ZRH7 1159 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 FASTKD5Q7L8L6 764 aaKnown RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 MCF2L2Q86YR7 1114 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 CPXCR1Q8N123 301 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 FERMT2Q96AC1 680 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 ANO3Q9BYT9 981 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 RAVER2Q9HCJ3 691 aaKnown RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 HOXC10Q9NYD6 342 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 FBXO2Q9UK22 296 aaPredicted RBP11.4□□□□□ -0.58
USP11-211ENST00000489111 KCNH4Q9UQ05 1017 aa11.4□□□□□ -0.58
USP11-211ENST00000489111 PAPPA2Q9BXP8 1791 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 LAD1O00515 517 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 WNT7AO00755 349 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 NEMFO60524 1076 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 CFBP00751 764 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 ALAS1P13196 640 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 GCFC2P16383 781 aaKnown RBP11.39□□□□□ -0.59
USP11-211ENST00000489111 LIG1P18858 919 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 PTPREP23469 700 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 CMA1P23946 247 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 HOXA13P31271 388 aaPredicted RBP11.39□□□□□ -0.59
USP11-211ENST00000489111 OAZ1P54368 228 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 PTGDRQ13258 359 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 AXDND1Q5T1B0 1012 aaPredicted RBP11.39□□□□□ -0.59
USP11-211ENST00000489111 TREML2Q5T2D2 321 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 GOLPH3LQ9H4A5 285 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 DACT1Q9NYF0 836 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 TMEM63CQ9P1W3 806 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 AGTPBP1Q9UPW5 1226 aa11.39□□□□□ -0.59
USP11-211ENST00000489111 SRPRBQ9Y5M8 271 aaKnown RBP11.39□□□□□ -0.59
USP11-211ENST00000489111 ZNF536O15090 1300 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
USP11-211ENST00000489111 MEIS2O14770 477 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 OPLAHO14841 1288 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms