RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ATP5JP18859 108 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 OAZ1P54368 228 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 TMEM67Q5HYA8 995 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 TMEM63BQ5T3F8 832 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 KRT40Q6A162 431 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 HAUS7Q99871 368 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 SEZ6LQ9BYH1 1024 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 PDGFCQ9NRA1 345 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
USP48-210ENST00000489108 HCN4Q9Y3Q4 1203 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 ARIH1Q9Y4X5 557 aaPredicted RBP19.36■□□□□ 0.69
USP48-210ENST00000489108 MYH7P12883 1935 aa19.35■□□□□ 0.69
USP48-210ENST00000489108 MINDY4BA8MYZ0 360 aa19.35■□□□□ 0.69
USP48-210ENST00000489108 GTPBP6O43824 516 aaPredicted RBP19.35■□□□□ 0.69
USP48-210ENST00000489108 TLL1O43897 1013 aa19.35■□□□□ 0.69
USP48-210ENST00000489108 CA3P07451 260 aa19.35■□□□□ 0.69
USP48-210ENST00000489108 SBK1Q52WX2 424 aa19.35■□□□□ 0.69
USP48-210ENST00000489108 MKL1Q969V6 931 aa19.35■□□□□ 0.69
USP48-210ENST00000489108 IGKV6D-41A0A0C4DH26 115 aa19.34■□□□□ 0.69
USP48-210ENST00000489108 EPOPA6NHQ4 379 aa19.34■□□□□ 0.69
USP48-210ENST00000489108 ASB14A6NK59 587 aa19.34■□□□□ 0.69
USP48-210ENST00000489108 TMEM31Q5JXX7 168 aa19.34■□□□□ 0.69
USP48-210ENST00000489108 DEFB128Q7Z7B8 93 aa19.34■□□□□ 0.69
USP48-210ENST00000489108 STRBPQ96SI9 672 aaKnown RBP19.34■□□□□ 0.69
USP48-210ENST00000489108 ACAD9Q9H845 621 aa19.34■□□□□ 0.69
USP48-210ENST00000489108 A1CFQ9NQ94 594 aaKnown RBP19.34■□□□□ 0.69
USP48-210ENST00000489108 GSG1L2A8MUP6 293 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 CYP2C9P11712 490 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 IQSEC1Q6DN90 963 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 TAPT1Q6NXT6 567 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 EEPD1Q7L9B9 569 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 LRRC47Q8N1G4 583 aaKnown RBP19.33■□□□□ 0.68
USP48-210ENST00000489108 PANK1Q8TE04 598 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 ALDH8A1Q9H2A2 487 aaPredicted RBP19.33■□□□□ 0.68
USP48-210ENST00000489108 COG5Q9UP83 839 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 COG6Q9Y2V7 657 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 SCN5AQ14524 2016 aa19.33■□□□□ 0.68
USP48-210ENST00000489108 BMP3P12645 472 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 SLFN13Q68D06 897 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 ZSCAN25Q6NSZ9 544 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 ZNF444Q8N0Y2 327 aaPredicted RBP19.32■□□□□ 0.68
USP48-210ENST00000489108 KHSRPQ92945 711 aaKnown RBP eCLIP19.32■□□□□ 0.689e-8■□□□□ 10.2
USP48-210ENST00000489108 CEP95Q96GE4 821 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 RNF146Q9NTX7 359 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 TRMT13Q9NUP7 481 aaKnown RBP19.32■□□□□ 0.68
USP48-210ENST00000489108 MTMR4Q9NYA4 1195 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 Q9Y3F1 56 aa19.32■□□□□ 0.68
USP48-210ENST00000489108 ZNF536O15090 1300 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 TMEM232C9JQI7 657 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 PRDM1O75626 825 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 ARHGEF15O94989 841 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 PFKMP08237 780 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 FDX1P10109 184 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 FBXO16Q8IX29 292 aaPredicted RBP19.31■□□□□ 0.68
USP48-210ENST00000489108 SIRT2Q8IXJ6 389 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 GMCL1P1Q8NEA9 526 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 ARNTL2Q8WYA1 636 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 CHMP4CQ96CF2 233 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 TRERF1Q96PN7 1200 aa19.31■□□□□ 0.68
USP48-210ENST00000489108 RAB11FIP3O75154 756 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 SUPT20HL2P0C7V6 817 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 TAP1Q03518 808 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 KIAA1211Q6ZU35 1233 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
USP48-210ENST00000489108 HLA-CQ95604 372 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 C11orf16Q9NQ32 467 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 ISY1Q9ULR0 285 aaKnown RBP19.3■□□□□ 0.68
USP48-210ENST00000489108 LRRC37A2A6NM11 1700 aa19.3■□□□□ 0.68
USP48-210ENST00000489108 TNKSO95271 1327 aa19.29■□□□□ 0.68
USP48-210ENST00000489108 GPR37L1O60883 481 aa19.29■□□□□ 0.68
USP48-210ENST00000489108 TTLL1O95922 423 aa19.29■□□□□ 0.68
USP48-210ENST00000489108 ALAS1P13196 640 aa19.29■□□□□ 0.68
USP48-210ENST00000489108 GIMAP6Q6P9H5 292 aa19.29■□□□□ 0.68
USP48-210ENST00000489108 PURBQ96QR8 312 aaKnown RBP19.29■□□□□ 0.68
USP48-210ENST00000489108 FAM86C2PA6NEL3 165 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 HMMRO75330 724 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 ACTN1P12814 892 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 STAT2P52630 851 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 SNAP25P60880 206 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 TKFCQ3LXA3 575 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 MUM1L1Q5H9M0 696 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 PHOSPHO2Q8TCD6 241 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 CHURC1Q8WUH1 139 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 SLC9A7Q96T83 725 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
USP48-210ENST00000489108 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 IKQ13123 557 aaPredicted RBP19.27■□□□□ 0.68
USP48-210ENST00000489108 GRB10Q13322 594 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 PPP1R13LQ8WUF5 828 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 OSBP2Q969R2 916 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 VTA1Q9NP79 307 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 CD320Q9NPF0 282 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 CYP39A1Q9NYL5 469 aa19.27■□□□□ 0.68
USP48-210ENST00000489108 KIF28PB7ZC32 967 aa19.26■□□□□ 0.67
USP48-210ENST00000489108 LPXNO60711 386 aa19.26■□□□□ 0.67
USP48-210ENST00000489108 MYL3P08590 195 aa19.26■□□□□ 0.67
USP48-210ENST00000489108 MCCP23508 829 aa19.26■□□□□ 0.67
USP48-210ENST00000489108 PURAQ00577 322 aaKnown RBP19.26■□□□□ 0.67
USP48-210ENST00000489108 DUSP28Q4G0W2 176 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms