RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 METTL16Q86W50 562 aaKnown RBP10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 CAPNS2Q96L46 248 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 GPR101Q96P66 508 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 MIR1-1HGQ9H1L0 117 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 TAOK3Q9H2K8 898 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 COPRSQ9NQ92 184 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 TLR6Q9Y2C9 796 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 ZNF521Q96K83 1311 aa10.21□□□□□ -0.78
TRAPPC12-221ENST00000489032 FANCIQ9NVI1 1328 aa10.21□□□□□ -0.78
TRAPPC12-221ENST00000489032 THSD7BQ9C0I4 1608 aa10.21□□□□□ -0.78
TRAPPC12-221ENST00000489032 CA12O43570 354 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 MYL6BP14649 208 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 GRM1Q13255 1194 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 TWISTNBQ3B726 338 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 RUSC1Q9BVN2 902 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 STK31Q9BXU1 1019 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 LTBP3Q9NS15 1303 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 IGSF5Q9NSI5 407 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 KCNK4Q9NYG8 393 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 NRXN2Q9P2S2 1712 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 NARFQ9UHQ1 456 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 ZNF652Q9Y2D9 606 aa10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC12-221ENST00000489032 CASP8AP2Q9UKL3 1982 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 LOC100289279A0A1B0GTE1 492 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 C9orf172C9J069 976 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 ADAM11O75078 769 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 SERPINB2P05120 415 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 PIP4K2AP48426 406 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 EXOSC9Q06265 439 aaKnown RBP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 SLFN5Q08AF3 891 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 NFIXQ14938 502 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 EXOSC6Q5RKV6 272 aaKnown RBP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 SNAP47Q5SQN1 464 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 PNMA8AQ86V59 439 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 C8orf58Q8NAV2 365 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 PHC3Q8NDX5 983 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 STK35Q8TDR2 534 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 ZNF622Q969S3 477 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 TGIF2Q9GZN2 237 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 DDX21Q9NR30 783 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 KRT82Q9NSB4 513 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 DBF4Q9UBU7 674 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 HACL1Q9UJ83 578 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 PCDHGB7Q9Y5F8 929 aa10.19□□□□□ -0.78
TRAPPC12-221ENST00000489032 SLFN14P0C7P3 912 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 EIF4A3P38919 411 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 NRG1Q02297 640 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 SCARA3Q6AZY7 606 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 GRIN3AQ8TCU5 1115 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 UBASH3BQ8TF42 649 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 JARID2Q92833 1246 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 HYPKQ9NX55 129 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 CHPF2Q9P2E5 772 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 DDX41Q9UJV9 622 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
TRAPPC12-221ENST00000489032 ZBED9Q6R2W3 1325 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 PF4P02776 101 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 EPHX2P34913 555 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 MAP2K2P36507 400 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 LMNB2Q03252 620 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 CAMK2GQ13555 558 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 CYP4F22Q6NT55 531 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 PDZD3Q86UT5 571 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 TSPYL6Q8N831 410 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 SPON2Q9BUD6 331 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 RNF208Q9H0X6 261 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 CYP4F12Q9HCS2 524 aa10.17□□□□□ -0.78
TRAPPC12-221ENST00000489032 LTBP1Q14766 1721 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 ERVV-1B6SEH8 477 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 CAMTA2O94983 1202 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 ECEL1O95672 775 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 TFE3P19532 575 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 SOX10P56693 466 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 FAM160A1Q05DH4 1040 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 AIMP1Q12904 312 aaKnown RBP10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 GNL2Q13823 731 aaKnown RBP10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 SOGA3Q5TF21 947 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 CLEC4GQ6UXB4 293 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 TRIM42Q8IWZ5 723 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 LENG1Q96BZ8 264 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 NRSN2Q9GZP1 204 aa10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 SUPT16HQ9Y5B9 1047 aaKnown RBP10.16□□□□□ -0.78
TRAPPC12-221ENST00000489032 MAP3K15Q6ZN16 1313 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 TM4SF5O14894 197 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 NPHP1O15259 732 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 VAMP4O75379 141 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 DDX58O95786 925 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 BPNT1O95861 308 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 ANXA1P04083 346 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 LIG1P18858 919 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 COL8A1P27658 744 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 PDE6BP35913 854 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 HSP90AB3PQ58FF7 597 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 FDX2Q6P4F2 183 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms