RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 UPF3AQ9H1J1 476 aaKnown RBP18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 CCPG1Q9ULG6 757 aa18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 MOXD2PA6NHM9 499 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 GRXCR1A8MXD5 290 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 CDK7P50613 346 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 CXCL17Q6UXB2 119 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 C16orf59Q7L2K0 433 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 PPP1R13LQ8WUF5 828 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 RILPL2Q969X0 211 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.8■□□□□ 0.63e-6■■■■■ 29.7
ERGIC3-217ENST00000488935 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
ERGIC3-217ENST00000488935 MYO9BQ13459 2157 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 DYNC1LI2O43237 492 aaPredicted RBP18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 TIMP1P01033 207 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 SMPD1P17405 629 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 TOX2Q96NM4 488 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 TMEM47Q9BQJ4 181 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 SPC25Q9HBM1 224 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 HELLSQ9NRZ9 838 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 CYP39A1Q9NYL5 469 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 ANAPC4Q9UJX5 808 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 TBX21Q9UL17 535 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 PRUNE2Q8WUY3 3088 aa18.79■□□□□ 0.6
ERGIC3-217ENST00000488935 LRRC37A2A6NM11 1700 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 RBAK-RBAKDNI3L0D1 243 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 ARVCFO00192 962 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 CSF2RAP15509 400 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 CYP2C18P33260 490 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 PSMC6P62333 389 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 SMAD3P84022 425 aaKnown RBP18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 MCMDC2Q4G0Z9 681 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 PCSK9Q8NBP7 692 aaKnown RBP18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 ZKSCAN3Q9BRR0 538 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 CPVLQ9H3G5 476 aa18.78■□□□□ 0.6
ERGIC3-217ENST00000488935 ELP1O95163 1332 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 UMODL1Q5DID0 1318 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 A0A0U1RQG5 324 aaPredicted RBP18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 NFIBO00712 420 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 ORC4O43929 436 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 BAATQ14032 418 aaPredicted RBP18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 ALX1Q15699 326 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 TAPT1Q6NXT6 567 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 TLK2Q86UE8 772 aa18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 COL25A1Q9BXS0 654 aaPredicted RBP18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 GNEQ9Y223 722 aaKnown RBP18.77■□□□□ 0.6
ERGIC3-217ENST00000488935 GRIN2DO15399 1336 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 ASB14A6NK59 587 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 PLA2G6O60733 806 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 IGHDP01880 384 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 FDX1P10109 184 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 PBX2P40425 430 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 TKFCQ3LXA3 575 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 SYDE2Q5VT97 1194 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 TBC1D10CQ8IV04 446 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 FAM126BQ8IXS8 530 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 MAFAQ8NHW3 353 aaPredicted RBP18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 RANBP17Q9H2T7 1088 aaKnown RBP18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 CUL9Q8IWT3 2517 aa18.76■□□□□ 0.59
ERGIC3-217ENST00000488935 VCANP13611 3396 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 FGRP09769 529 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 GOLGA8HP0CJ92 632 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 TOP1P11387 765 aaKnown RBP18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 NOVP48745 357 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 GRIN2CQ14957 1233 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 TMEM240Q5SV17 173 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 SLC30A10Q6XR72 485 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 KIAA1211Q6ZU35 1233 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 AP5M1Q9H0R1 490 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 TRPV6Q9H1D0 765 aa18.75■□□□□ 0.59
ERGIC3-217ENST00000488935 PTPDC1A2A3K4 754 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 ICAM1P05362 532 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 CALML3P27482 149 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 CCL23P55773 120 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 ZNF365Q70YC5 407 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 NEDD4P46934 1319 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
ERGIC3-217ENST00000488935 PDHBP11177 359 aa18.73■□□□□ 0.59
ERGIC3-217ENST00000488935 FOSL2P15408 326 aa18.73■□□□□ 0.59
ERGIC3-217ENST00000488935 DNAJB2P25686 324 aa18.73■□□□□ 0.59
ERGIC3-217ENST00000488935 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
ERGIC3-217ENST00000488935 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
ERGIC3-217ENST00000488935 UBA5Q9GZZ9 404 aa18.73■□□□□ 0.59
ERGIC3-217ENST00000488935 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 CD4P01730 458 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 SDSP20132 328 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 ALDH5A1P51649 535 aaPredicted RBP18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 BTNL9Q6UXG8 535 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 PLEKHM2Q8IWE5 1019 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 EXOC6Q8TAG9 804 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 COPS5Q92905 334 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms