RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TNFRSF10CO14798 259 aa5.3□□□□□ -1.56
CCDC93-209ENST00000488908 AKAP8O43823 692 aaKnown RBP5.3□□□□□ -1.56
CCDC93-209ENST00000488908 NME1P15531 152 aaKnown RBP5.3□□□□□ -1.56
CCDC93-209ENST00000488908 GJA9P57773 515 aa5.3□□□□□ -1.56
CCDC93-209ENST00000488908 ADAM17P78536 824 aa5.3□□□□□ -1.56
CCDC93-209ENST00000488908 ZXDAP98168 799 aa5.3□□□□□ -1.56
CCDC93-209ENST00000488908 GK5Q6ZS86 529 aa5.3□□□□□ -1.56
CCDC93-209ENST00000488908 ERMP1Q7Z2K6 904 aa5.3□□□□□ -1.56
CCDC93-209ENST00000488908 REXO1Q8N1G1 1221 aaKnown RBP5.3□□□□□ -1.56
CCDC93-209ENST00000488908 NOBOXO60393 691 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 ITGB3P05106 788 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 CRKP46108 304 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 CORO7P57737 925 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 PRR5P85299 388 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 CLCQ05315 142 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 C7orf61Q8IZ16 206 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 CARFQ8N187 725 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 RGS22Q8NE09 1264 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 DDX1Q92499 740 aaKnown RBP5.29□□□□□ -1.56
CCDC93-209ENST00000488908 DHRS1Q96LJ7 313 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 LNPKQ9C0E8 428 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 PLA2G2DQ9UNK4 145 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 DUSP10Q9Y6W6 482 aa5.29□□□□□ -1.56
CCDC93-209ENST00000488908 MEIS3P2A8K0S8 358 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 FGF10O15520 208 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-209ENST00000488908 SUV39H1O43463 412 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 MCM4P33991 863 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 NOP2P46087 812 aaKnown RBP5.28□□□□□ -1.56
CCDC93-209ENST00000488908 ZNF165P49910 485 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-209ENST00000488908 SEZ6Q53EL9 994 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 B3GNT8Q7Z7M8 397 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 CCDC144CPQ8IYA2 1237 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 ZNF296Q8WUU4 475 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-209ENST00000488908 ALG3Q92685 438 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 SRRTQ9BXP5 876 aaKnown RBP5.28□□□□□ -1.56
CCDC93-209ENST00000488908 COPRSQ9NQ92 184 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
CCDC93-209ENST00000488908 SRRDQ9UH36 339 aa5.28□□□□□ -1.56
CCDC93-209ENST00000488908 MATN3O15232 486 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 TBC1D8O95759 1140 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 ASGR2P07307 311 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 TACR1P25103 407 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 MC3RP41968 323 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 CPZQ66K79 652 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 SND1Q7KZF4 910 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC93-209ENST00000488908 ERICH6Q7L0X2 663 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 FBXO33Q7Z6M2 555 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 USP48Q86UV5 1035 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 SLC9A7Q96T83 725 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 NTMQ9P121 344 aa5.27□□□□□ -1.57
CCDC93-209ENST00000488908 H0Y8X5 98 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 SHOXO15266 292 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 APOBRQ0VD83 1088 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 NOL9Q5SY16 702 aaKnown RBP5.26□□□□□ -1.57
CCDC93-209ENST00000488908 CABP7Q86V35 215 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 TTC9BQ8N6N2 239 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 NLGN2Q8NFZ4 835 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 RBM15Q96T37 977 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC93-209ENST00000488908 UBP1Q9NZI7 540 aa5.26□□□□□ -1.57
CCDC93-209ENST00000488908 C9IYK1 514 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 C1QTNF3-AMACRE9PGA6 284 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 PMLP29590 882 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 L1CAMP32004 1257 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 SARSP49591 514 aaKnown RBP5.25□□□□□ -1.57
CCDC93-209ENST00000488908 INTS3Q68E01 1043 aaKnown RBP5.25□□□□□ -1.57
CCDC93-209ENST00000488908 ZNF761Q86XN6 746 aaPredicted RBP5.25□□□□□ -1.57
CCDC93-209ENST00000488908 SMARCC1Q92922 1105 aaPredicted RBP5.25□□□□□ -1.57
CCDC93-209ENST00000488908 TSPAN17Q96FV3 270 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 PTCHD1Q96NR3 888 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 SAMD11Q96NU1 681 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 C1QTNF3Q9BXJ4 246 aa5.25□□□□□ -1.57
CCDC93-209ENST00000488908 FAM86C2PA6NEL3 165 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 FSHBP01225 129 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 GLI4P10075 376 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 PMS1P54277 932 aaKnown RBP5.24□□□□□ -1.57
CCDC93-209ENST00000488908 ANKRD39Q53RE8 183 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 DNAJC14Q6Y2X3 702 aaPredicted RBP5.24□□□□□ -1.57
CCDC93-209ENST00000488908 TTLL7Q6ZT98 887 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 SLC16A11Q8NCK7 471 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 SMARCC2Q8TAQ2 1214 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 LOXL4Q96JB6 756 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 FCRL3Q96P31 734 aaPredicted RBP5.24□□□□□ -1.57
CCDC93-209ENST00000488908 ADAMTS1Q9UHI8 967 aa5.24□□□□□ -1.57
CCDC93-209ENST00000488908 SF3B6Q9Y3B4 125 aaKnown RBP5.24□□□□□ -1.57
CCDC93-209ENST00000488908 ZNF445P59923 1031 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 TRIM26Q12899 539 aaPredicted RBP5.23□□□□□ -1.57
CCDC93-209ENST00000488908 SLC9A5Q14940 896 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 DCAF15Q66K64 600 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 CPA5Q8WXQ8 436 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 BRF1Q92994 677 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 NKD1Q969G9 470 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 C8orf49Q96NF6 230 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 GP6Q9HCN6 339 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 NUDT5Q9UKK9 219 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 FHOD1Q9Y613 1164 aa5.23□□□□□ -1.57
CCDC93-209ENST00000488908 PLATP00750 562 aa5.22□□□□□ -1.57
CCDC93-209ENST00000488908 CD3EP07766 207 aa5.22□□□□□ -1.57
CCDC93-209ENST00000488908 IFNGR1P15260 489 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms