RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 FRMPD4Q14CM0 1322 aa12.27□□□□□ -0.45
USP11-209ENST00000488848 SMCO2A6NFE2 343 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 MEIS2O14770 477 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 FOSP01100 380 aaPredicted RBP12.26□□□□□ -0.45
USP11-209ENST00000488848 CETPP11597 493 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 TOB1P50616 345 aaPredicted RBP12.26□□□□□ -0.45
USP11-209ENST00000488848 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP11-209ENST00000488848 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 ZYXQ15942 572 aaKnown RBP12.26□□□□□ -0.45
USP11-209ENST00000488848 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 TANGO6Q9C0B7 1094 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 PCDHA6Q9UN73 950 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 MRPL11Q9Y3B7 192 aaKnown RBP12.26□□□□□ -0.45
USP11-209ENST00000488848 PCDHA8Q9Y5H6 950 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 TLL2Q9Y6L7 1015 aa12.26□□□□□ -0.45
USP11-209ENST00000488848 ZBED4O75132 1171 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 COPB2P35606 906 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 HSD17B4P51659 736 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 IKQ13123 557 aaPredicted RBP12.25□□□□□ -0.45
USP11-209ENST00000488848 DGKZQ13574 1117 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 PTPAQ15257 358 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 TREML2Q5T2D2 321 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 MCTP1Q6DN14 999 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 MOXD1Q6UVY6 613 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 LINC00301Q8NCQ3 95 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 KCNG4Q8TDN1 519 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 LEO1Q8WVC0 666 aaPredicted RBP12.25□□□□□ -0.45
USP11-209ENST00000488848 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 COA7Q96BR5 231 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 USP28Q96RU2 1077 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 TEX13BQ9BXU2 312 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 PSTPIP2Q9H939 334 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 VAT1LQ9HCJ6 419 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
USP11-209ENST00000488848 MYH7BA7E2Y1 1941 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 RAD21O60216 631 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 PPP6R2O75170 966 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 SLC10A3P09131 477 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
USP11-209ENST00000488848 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 RASAL3Q86YV0 1011 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 CLEC4DQ8WXI8 215 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 ATG4CQ96DT6 458 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 MBOAT7Q96N66 472 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 THSD7BQ9C0I4 1608 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
USP11-209ENST00000488848 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
USP11-209ENST00000488848 ZNF236Q9UL36 1845 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 CYP3A7-CYP3A51PA0A087WV96 503 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 FAM237AA0A1B0GTK4 181 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 LAD1O00515 517 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 CYP3A7P24462 503 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 SREBF1P36956 1147 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 HUNKP57058 714 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 GNL2Q13823 731 aaKnown RBP12.23□□□□□ -0.45
USP11-209ENST00000488848 NONOQ15233 471 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP11-209ENST00000488848 PPP4R3AQ6IN85 833 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 FAM173BQ6P4H8 233 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 MCF2L2Q86YR7 1114 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 ZNF526Q8TF50 670 aaPredicted RBP12.23□□□□□ -0.45
USP11-209ENST00000488848 BRI3BPQ8WY22 251 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 NAP1L4Q99733 375 aaKnown RBP12.23□□□□□ -0.45
USP11-209ENST00000488848 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
USP11-209ENST00000488848 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
USP11-209ENST00000488848 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 ADGRA2Q96PE1 1338 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 A0A1W2PQ27 194 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 A0A1W2PQ64 194 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 A0A1W2PQD8 194 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 MANSC4A6NHS7 340 aaPredicted RBP12.22□□□□□ -0.45
USP11-209ENST00000488848 EDIL3O43854 480 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 CYP3A4P08684 503 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
USP11-209ENST00000488848 CIITAP33076 1130 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 PRPHP41219 470 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 USP11P51784 963 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 FOSBP53539 338 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 INHBEP58166 350 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 UBE2HP62256 183 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 HERVK_113P62684 666 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 TMEM132BQ14DG7 1078 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 FOXD4L5Q5VV16 416 aaPredicted RBP12.22□□□□□ -0.45
USP11-209ENST00000488848 ARL6IP4Q66PJ3 421 aaKnown RBP12.22□□□□□ -0.45
USP11-209ENST00000488848 RGMBQ6NW40 437 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 RIOX2Q8IUF8 465 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 SHCBP1Q8NEM2 672 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 FOXD4L4Q8WXT5 416 aaPredicted RBP12.22□□□□□ -0.45
USP11-209ENST00000488848 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 CCDC102AQ96A19 550 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 ZNF408Q9H9D4 720 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
USP11-209ENST00000488848 CCPG1Q9ULG6 757 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms