RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 PCSK9Q8NBP7 692 aaKnown RBP21.56■■□□□ 1.04
ATG9A-222ENST00000488833 GLT1D1Q96MS3 346 aa21.56■■□□□ 1.04
ATG9A-222ENST00000488833 RANBP17Q9H2T7 1088 aaKnown RBP21.56■■□□□ 1.04
ATG9A-222ENST00000488833 OSBPL3Q9H4L5 887 aa21.56■■□□□ 1.04
ATG9A-222ENST00000488833 CYP39A1Q9NYL5 469 aa21.56■■□□□ 1.04
ATG9A-222ENST00000488833 DCDC2CA8MYV0 355 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 KIAA0355O15063 1070 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 ASGR1P07306 291 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 RAG1P15918 1043 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 ITGB8P26012 769 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 BTNL9Q6UXG8 535 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
ATG9A-222ENST00000488833 ANKRD33Q7Z3H0 272 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
ATG9A-222ENST00000488833 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 TMEM39AQ9NV64 488 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 ASTN1O14525 1302 aa21.55■■□□□ 1.04
ATG9A-222ENST00000488833 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.54■■□□□ 1.04
ATG9A-222ENST00000488833 PCP11498 1178 aaKnown RBP21.54■■□□□ 1.04
ATG9A-222ENST00000488833 TNFAIP2Q03169 654 aa21.54■■□□□ 1.04
ATG9A-222ENST00000488833 GNASQ5JWF2 1037 aa21.54■■□□□ 1.04
ATG9A-222ENST00000488833 VTI1AQ96AJ9 217 aa21.54■■□□□ 1.04
ATG9A-222ENST00000488833 TOX2Q96NM4 488 aa21.54■■□□□ 1.04
ATG9A-222ENST00000488833 DDX49Q9Y6V7 483 aaKnown RBP21.54■■□□□ 1.04
ATG9A-222ENST00000488833 ELP1O95163 1332 aa21.54■■□□□ 1.04
ATG9A-222ENST00000488833 NEDD4P46934 1319 aa21.54■■□□□ 1.04
ATG9A-222ENST00000488833 PDHBP11177 359 aa21.53■■□□□ 1.04
ATG9A-222ENST00000488833 FAAP100Q0VG06 881 aa21.53■■□□□ 1.04
ATG9A-222ENST00000488833 CWC27Q6UX04 472 aaKnown RBP21.53■■□□□ 1.04
ATG9A-222ENST00000488833 FBXO16Q8IX29 292 aaPredicted RBP21.53■■□□□ 1.04
ATG9A-222ENST00000488833 SLC17A8Q8NDX2 589 aa21.53■■□□□ 1.04
ATG9A-222ENST00000488833 ESR2Q92731 530 aa21.53■■□□□ 1.04
ATG9A-222ENST00000488833 MROH7Q68CQ1 1323 aa21.53■■□□□ 1.04
ATG9A-222ENST00000488833 COL6A3P12111 3177 aa21.52■■□□□ 1.04
ATG9A-222ENST00000488833 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
ATG9A-222ENST00000488833 BEX3Q00994 111 aa21.52■■□□□ 1.04
ATG9A-222ENST00000488833 FPGSQ05932 587 aa21.52■■□□□ 1.04
ATG9A-222ENST00000488833 TLK2Q86UE8 772 aa21.52■■□□□ 1.04
ATG9A-222ENST00000488833 STXBP5LQ9Y2K9 1186 aa21.52■■□□□ 1.04
ATG9A-222ENST00000488833 HIP1O00291 1037 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 NFIBO00712 420 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 ZNF213O14771 459 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 CTAGE5O15320 804 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 ZNF543Q08ER8 600 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 FAM109BQ6ICB4 259 aaPredicted RBP21.51■■□□□ 1.03
ATG9A-222ENST00000488833 EEPD1Q7L9B9 569 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 FAM161BQ96MY7 647 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 TTC14Q96N46 770 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 PURBQ96QR8 312 aaKnown RBP21.51■■□□□ 1.03
ATG9A-222ENST00000488833 ZKSCAN3Q9BRR0 538 aa21.51■■□□□ 1.03
ATG9A-222ENST00000488833 LAMA2P24043 3122 aaKnown RBP21.5■■□□□ 1.03
ATG9A-222ENST00000488833 EPHB4P54760 987 aa21.5■■□□□ 1.03
ATG9A-222ENST00000488833 BAATQ14032 418 aaPredicted RBP21.5■■□□□ 1.03
ATG9A-222ENST00000488833 ZNF697Q5TEC3 545 aa21.5■■□□□ 1.03
ATG9A-222ENST00000488833 RNPC3Q96LT9 517 aaKnown RBP21.5■■□□□ 1.03
ATG9A-222ENST00000488833 AP5M1Q9H0R1 490 aa21.5■■□□□ 1.03
ATG9A-222ENST00000488833 VTA1Q9NP79 307 aa21.5■■□□□ 1.03
ATG9A-222ENST00000488833 PDGFCQ9NRA1 345 aa21.5■■□□□ 1.03
ATG9A-222ENST00000488833 TBX21Q9UL17 535 aa21.5■■□□□ 1.03
ATG9A-222ENST00000488833 GNEQ9Y223 722 aaKnown RBP21.5■■□□□ 1.03
ATG9A-222ENST00000488833 PTPDC1A2A3K4 754 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 ARVCFO00192 962 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 SNHG28P0DPA3 235 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 SMPD1P17405 629 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 PTGS1P23219 599 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 CDK7P50613 346 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 NKX3-2P78367 333 aa21.49■■□□□ 1.03
ATG9A-222ENST00000488833 ADD3Q9UEY8 706 aaKnown RBP21.49■■□□□ 1.03
ATG9A-222ENST00000488833 KDM4AO75164 1064 aa21.48■■□□□ 1.03
ATG9A-222ENST00000488833 ALDH5A1P51649 535 aaPredicted RBP21.48■■□□□ 1.03
ATG9A-222ENST00000488833 FSCN1Q16658 493 aaKnown RBP21.48■■□□□ 1.03
ATG9A-222ENST00000488833 TAPT1Q6NXT6 567 aa21.48■■□□□ 1.03
ATG9A-222ENST00000488833 CXCL17Q6UXB2 119 aa21.48■■□□□ 1.03
ATG9A-222ENST00000488833 SLC30A10Q6XR72 485 aa21.48■■□□□ 1.03
ATG9A-222ENST00000488833 GUCD1Q96NT3 240 aa21.48■■□□□ 1.03
ATG9A-222ENST00000488833 PNMA2Q9UL42 364 aa21.48■■□□□ 1.03
ATG9A-222ENST00000488833 TLR3O15455 904 aaKnown RBP21.47■■□□□ 1.03
ATG9A-222ENST00000488833 DYNC1LI2O43237 492 aaPredicted RBP21.47■■□□□ 1.03
ATG9A-222ENST00000488833 TIMP1P01033 207 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 CALML3P27482 149 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 SMAD3P84022 425 aaKnown RBP21.47■■□□□ 1.03
ATG9A-222ENST00000488833 GPATCH4Q5T3I0 446 aaKnown RBP21.47■■□□□ 1.03
ATG9A-222ENST00000488833 IQSEC1Q6DN90 963 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 IQCA1Q86XH1 822 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 DGKHQ86XP1 1220 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 MORC4Q8TE76 937 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 DSCC1Q9BVC3 393 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 WDR19Q8NEZ3 1342 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 CUL9Q8IWT3 2517 aa21.47■■□□□ 1.03
ATG9A-222ENST00000488833 B4E1Z4 1266 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 ZEB2O60315 1214 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 GOLGA8HP0CJ92 632 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 NT5C2P49902 561 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 CCDC178Q5BJE1 867 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 KIAA1211Q6ZU35 1233 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 PNMA1Q8ND90 353 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 CLEC4DQ8WXI8 215 aa21.46■■□□□ 1.03
ATG9A-222ENST00000488833 CABYRO75952 493 aa21.45■■□□□ 1.02
ATG9A-222ENST00000488833 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms