RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 PTGS1P23219 599 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 ACLYP53396 1101 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 SNX17Q15036 470 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 ESR2Q92731 530 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 BADQ92934 168 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 RANBP17Q9H2T7 1088 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 STARD7Q9NQZ5 370 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 PDLIM7Q9NR12 457 aa13.29□□□□□ -0.28
NIPAL3-207ENST00000488155 TRIM43BA6NCK2 446 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 ICAM1P05362 532 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 PCP11498 1178 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 GSPT1P15170 499 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 BEX3Q00994 111 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 Q7L0L9 218 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 KLHDC9Q8NEP7 349 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 TRIM43Q96BQ3 446 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 KATNBL1Q9H079 304 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 ASTN1O14525 1302 aa13.28□□□□□ -0.28
NIPAL3-207ENST00000488155 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 ASB14A6NK59 587 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 NFIBO00712 420 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 ASGR1P07306 291 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 TNFAIP2Q03169 654 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 GNASQ5JWF2 1037 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 IQCA1Q86XH1 822 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 TTC14Q96N46 770 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 TSEN34Q9BSV6 310 aaKnown RBP13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 DSCC1Q9BVC3 393 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 SPC25Q9HBM1 224 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 PDGFCQ9NRA1 345 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 ZSWIM5Q9P217 1185 aa13.27□□□□□ -0.29
NIPAL3-207ENST00000488155 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 CLTBP09497 229 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 ITGB8P26012 769 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 CALML3P27482 149 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 USH1GQ495M9 461 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 CCSAPQ6IQ19 270 aaPredicted RBP13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 PNMA1Q8ND90 353 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 KAT14Q9H8E8 782 aa13.26□□□□□ -0.29
NIPAL3-207ENST00000488155 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 SNHG28P0DPA3 235 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 GJA9P57773 515 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 SHHQ15465 462 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 SLC30A10Q6XR72 485 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 KIAA1211Q6ZU35 1233 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 DGKHQ86XP1 1220 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 DEFB123Q8N688 67 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 PCSK9Q8NBP7 692 aaKnown RBP13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 ZSCAN10Q96SZ4 725 aaPredicted RBP13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 VAT1LQ9HCJ6 419 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 CTNNA3Q9UI47 895 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 SCN5AQ14524 2016 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 GBF1Q92538 1859 aa13.25□□□□□ -0.29
NIPAL3-207ENST00000488155 TNKSO95271 1327 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 CTAGE5O15320 804 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 RAG1P15918 1043 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 SMPD1P17405 629 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 ALDH5A1P51649 535 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 PTH1RQ03431 593 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 TAPT1Q6NXT6 567 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 RNF207Q6ZRF8 634 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 CLEC4DQ8WXI8 215 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 KRT23Q9C075 422 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 AP5M1Q9H0R1 490 aa13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-207ENST00000488155 DOCK5Q9H7D0 1870 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 CHMLP26374 656 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 CDC37Q16543 378 aaPredicted RBP13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 GPATCH4Q5T3I0 446 aaKnown RBP13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 TBC1D5Q92609 795 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
NIPAL3-207ENST00000488155 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms