RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TMC6Q7Z403 805 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 SPATS2Q86XZ4 545 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 TMEM139Q8IV31 216 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 AOPEPQ8N6M6 819 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 CEP112Q8N8E3 955 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 C8orf58Q8NAV2 365 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 TTC16Q8NEE8 873 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 ENGASEQ8NFI3 743 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 AFAP1L1Q8TED9 768 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 SNX29Q8TEQ0 813 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 PLCD4Q9BRC7 762 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 PAGR1Q9BTK6 254 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 OSBPL7Q9BZF2 842 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 GSX2Q9BZM3 304 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 XPO4Q9C0E2 1151 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 EPC1Q9H2F5 836 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 FNDC3AQ9Y2H6 1198 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 PPP2R2CQ9Y2T4 447 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 PCDHGC4Q9Y5F7 938 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 FAM169AQ9Y6X4 670 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 SOS1Q07889 1333 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 RPGRIP1LQ68CZ1 1315 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 PXDNLA1KZ92 1463 aa5.4□□□□□ -1.55
CDC42BPA-213ENST00000488131 NRKQ7Z2Y5 1582 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 FAM208AQ9UK61 1670 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SPDYE3A6NKU9 549 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 H0YHG0 523 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 EBAG9O00559 213 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 IKBKBO14920 756 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SORBS3O60504 671 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 CUTAO60888 179 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 IFIT2P09913 472 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 MAPTP10636 758 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 EPXP11678 715 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 TXKP42681 527 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 LIG3P49916 1009 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SARNPP82979 210 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 FAM160A1Q05DH4 1040 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ADCY2Q08462 1091 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 PSMD2Q13200 908 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 GNL2Q13823 731 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 DOC2BQ14184 412 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 PLCB4Q15147 1175 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ME3Q16798 604 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 KRT24Q2M2I5 525 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 C9orf131Q5VYM1 1079 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 FBXW10Q5XX13 1052 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ATL3Q6DD88 541 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 WDR93Q6P2C0 686 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 C1orf229Q6ZS94 237 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 UNC5CLQ8IV45 518 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 MAGEC3Q8TD91 643 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 FBF1Q8TES7 1133 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ZKSCAN4Q969J2 545 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 WDR24Q96S15 920 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 THUMPD2Q9BTF0 503 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 TRIM6Q9C030 488 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 KCNH4Q9UQ05 1017 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 CDHR2Q9BYE9 1310 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 USP42Q9H9J4 1324 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ARAP3Q8WWN8 1544 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ANKRD65E5RJM6 399 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 KHNYNO15037 678 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 PHACTR2O75167 634 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 EPB42P16452 691 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 PRKAR2BP31323 418 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 NF2P35240 595 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 GATA4P43694 442 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 HDLBPQ00341 1268 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 TBC1D8BQ0IIM8 1120 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 NCAPHQ15003 741 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 KIF4BQ2VIQ3 1234 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 KRT25Q7Z3Z0 450 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ANKRD18AQ8IVF6 992 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 CCAR1Q8IX12 1150 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 N4BP2L2Q92802 583 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 DHX58Q96C10 678 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SYTL4Q96C24 671 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ABHD17AQ96GS6 310 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 CLIC6Q96NY7 704 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 PNKPQ96T60 521 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SLC30A3Q99726 388 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 JPH2Q9BR39 696 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 TEX13AQ9BXU3 409 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SUV39H2Q9H5I1 410 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 C14orf93Q9H972 538 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ABCB6Q9NP58 842 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ETAA1Q9NY74 926 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 TERF2IPQ9NYB0 399 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 ABI2Q9NYB9 513 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 IFNKQ9P0W0 207 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 RCOR1Q9UKL0 485 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 CFAP45Q9UL16 551 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 CYP46A1Q9Y6A2 500 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 AK5Q9Y6K8 562 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 NEDD4P46934 1319 aa5.39□□□□□ -1.55
CDC42BPA-213ENST00000488131 SBNO1A3KN83 1393 aa5.38□□□□□ -1.55
CDC42BPA-213ENST00000488131 CEMIPQ8WUJ3 1361 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms