RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 KLRC3Q07444 240 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 CCDC96Q2M329 555 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 TTBK2Q6IQ55 1244 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 KRBA2Q6ZNG9 492 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 ENGASEQ8NFI3 743 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 NUP88Q99567 741 aaPredicted RBP15.53■□□□□ 0.08
COPS7B-221ENST00000488111 RNF26Q9BY78 433 aaPredicted RBP15.53■□□□□ 0.08
COPS7B-221ENST00000488111 SSC5DA1L4H1 1573 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 PRPF3O43395 683 aaKnown RBP15.53■□□□□ 0.08
COPS7B-221ENST00000488111 CTNND1O60716 968 aaKnown RBP15.53■□□□□ 0.08
COPS7B-221ENST00000488111 DEXIO95424 95 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 PKN1Q16512 942 aa15.53■□□□□ 0.08
COPS7B-221ENST00000488111 ZC3H15Q8WU90 426 aaKnown RBP15.53■□□□□ 0.08
COPS7B-221ENST00000488111 STK36Q9NRP7 1315 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 SNHG28P0DPA3 235 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 SLC16A2P36021 539 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 GNAQP50148 359 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 GPS2Q13227 327 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
COPS7B-221ENST00000488111 HOOK2Q96ED9 719 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 NAT10Q9H0A0 1025 aaKnown RBP15.52■□□□□ 0.08
COPS7B-221ENST00000488111 ARHGEF10LQ9HCE6 1279 aa15.52■□□□□ 0.08
COPS7B-221ENST00000488111 CCP110O43303 1012 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 NDUFB10O96000 172 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 SLC1A4P43007 532 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 ZNF543Q08ER8 600 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 KIAA1755Q5JYT7 1200 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 MAP1SQ66K74 1059 aaPredicted RBP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 CCDC73Q6ZRK6 1079 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 FBXO18Q8NFZ0 1043 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 KLRG1Q96E93 195 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 ZNF112Q9UJU3 913 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 EFCAB8A8MWE9 144 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 KINO60870 393 aaKnown RBP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 USP2O75604 605 aaPredicted RBP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 SASH3O75995 380 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 SFPQP23246 707 aaKnown RBP eCLIP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 OAS2P29728 719 aaKnown RBP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 IRX3P78415 501 aaPredicted RBP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 FAM160A1Q05DH4 1040 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 KRT40Q6A162 431 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 CDCA5Q96FF9 252 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 BPIFA3Q9BQP9 254 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 VPS54Q9P1Q0 977 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 KCNJ14Q9UNX9 436 aa15.51■□□□□ 0.07
COPS7B-221ENST00000488111 BAZ2BQ9UIF8 2168 aaKnown RBP15.51■□□□□ 0.07
COPS7B-221ENST00000488111 A0A087WWV3 80 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 SEC31AO94979 1220 aaKnown RBP15.5■□□□□ 0.07
COPS7B-221ENST00000488111 FMR1Q06787 632 aaKnown RBP eCLIP15.5■□□□□ 0.07
COPS7B-221ENST00000488111 DGKZQ13574 1117 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 ZSCAN26Q16670 478 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 WASF1Q92558 559 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 NMRK2Q9NPI5 230 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 PSD3Q9NYI0 1048 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 NRDCO43847 1150 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 MOB2Q70IA6 237 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 TMC6Q7Z403 805 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 SCYL3Q8IZE3 742 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 MNS1Q8NEH6 495 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 XPO4Q9C0E2 1151 aaKnown RBP15.5■□□□□ 0.07
COPS7B-221ENST00000488111 RSPH14Q9UHP6 348 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 DNAI1Q9UI46 699 aa15.5■□□□□ 0.07
COPS7B-221ENST00000488111 MYO1CO00159 1063 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 NOP2P46087 812 aaKnown RBP15.49■□□□□ 0.07
COPS7B-221ENST00000488111 TRIM29Q14134 588 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 CC2D1AQ6P1N0 951 aaPredicted RBP15.49■□□□□ 0.07
COPS7B-221ENST00000488111 GMCL1P1Q8NEA9 526 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 GPKOWQ92917 476 aaPredicted RBP eCLIP15.49■□□□□ 0.07
COPS7B-221ENST00000488111 LZTS2Q9BRK4 669 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 CWC15Q9P013 229 aaKnown RBP15.49■□□□□ 0.07
COPS7B-221ENST00000488111 MYH4Q9Y623 1939 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 SMC1AQ14683 1233 aaKnown RBP15.49■□□□□ 0.07
COPS7B-221ENST00000488111 IQUBQ8NA54 791 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 PIGSQ96S52 555 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 PICK1Q9NRD5 415 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 WDR90Q96KV7 1748 aa15.49■□□□□ 0.07
COPS7B-221ENST00000488111 TRAF5O00463 557 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 SCG2P13521 617 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
COPS7B-221ENST00000488111 PFKFB3Q16875 520 aaPredicted RBP15.48■□□□□ 0.07
COPS7B-221ENST00000488111 GPATCH4Q5T3I0 446 aaKnown RBP15.48■□□□□ 0.07
COPS7B-221ENST00000488111 ATL3Q6DD88 541 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 REXO1L1PQ8IX06 675 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.48■□□□□ 0.07
COPS7B-221ENST00000488111 GOLGA5Q8TBA6 731 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 DCAF4Q8WV16 495 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 SPZ1Q9BXG8 430 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 YY1AP1Q9H869 796 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 SCN4AP35499 1836 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 KIF28PB7ZC32 967 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 TMEM232C9JQI7 657 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 FANCGO15287 622 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 PPP1R12BO60237 982 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms