RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 ATG4CQ96DT6 458 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 P2RX7Q99572 595 aaKnown RBP12.68□□□□□ -0.38
HDLBP-242ENST00000488013 PHF20Q9BVI0 1012 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 hCG_1642624A0A1W2PR95 340 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 SMCO2A6NFE2 343 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 FOSP01100 380 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-242ENST00000488013 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-242ENST00000488013 DGKZQ13574 1117 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 SHCBP1Q8NEM2 672 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 GPRC5AQ8NFJ5 357 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 ZFYVE28Q9HCC9 887 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 MTMR6Q9Y217 621 aa12.67□□□□□ -0.38
HDLBP-242ENST00000488013 MYH8P13535 1937 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 GCOM1H8Y6P7 765 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 POLR2MP0CAP2 368 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.387e-6■■□□□ 14.4
HDLBP-242ENST00000488013 TRAPPC10P48553 1259 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 AP3B2Q13367 1082 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 DIS3L2Q8IYB7 885 aaKnown RBP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 BLIDQ8IZY5 108 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 SPATC1LQ9H0A9 340 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 MROH8Q9H579 483 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
HDLBP-242ENST00000488013 RAVER2Q9HCJ3 691 aaKnown RBP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-242ENST00000488013 ZNF536O15090 1300 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 PPP1R11O60927 126 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 GHRHRQ02643 423 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 PLS1Q14651 629 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 TAF1CQ15572 869 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 USH1GQ495M9 461 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 SNRNP48Q6IEG0 339 aaKnown RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 CCAR1Q8IX12 1150 aaKnown RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 COA7Q96BR5 231 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 PTPN18Q99952 460 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 MORF4L1Q9UBU8 362 aa12.65□□□□□ -0.38
HDLBP-242ENST00000488013 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-242ENST00000488013 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 SPDYE3A6NKU9 549 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 CA12O43570 354 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 F13A1P00488 732 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 ALAS1P13196 640 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 ERVK-9P63128 1117 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 ERVK-24P63145 666 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 RILPL1Q5EBL4 403 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDLBP-242ENST00000488013 NOSTRINQ8IVI9 506 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-242ENST00000488013 RNF146Q9NTX7 359 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 RBPJLQ9UBG7 517 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 KCNJ14Q9UNX9 436 aa12.64□□□□□ -0.39
HDLBP-242ENST00000488013 PFASO15067 1338 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 B4DLN1 442 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDLBP-242ENST00000488013 STRNO43815 780 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 TLR2O60603 784 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 BMP15O95972 392 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 CYP2C8P10632 490 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 HSPA6P17066 643 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 SNAP25P60880 206 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 GUCY1B3Q02153 619 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 GRM1Q13255 1194 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-242ENST00000488013 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 ABRAQ8N0Z2 381 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 MPHOSPH6Q99547 160 aaKnown RBP12.63□□□□□ -0.39
HDLBP-242ENST00000488013 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
HDLBP-242ENST00000488013 CFHR5Q9BXR6 569 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms