RNA–Protein interactions for RNA: ENST00000487943.5

IFT80-223, Transcript of intraflagellar transport 80, human

TSL 2

Gene IFT80, Length 3,893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT80-223	ENST00000487943	PLAGL2	Q9UPG8	496 aa		7.51	□□□□□ -1.21
IFT80-223	ENST00000487943	FAM205A	Q6ZU69	1335 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ATAD5	Q96QE3	1844 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ROBO3	Q96MS0	1386 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	BICDL2	A1A5D9	508 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ZEB2	O60315	1214 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	MCM7	P33993	719 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ALS2CL	Q60I27	953 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ICE2	Q659A1	982 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	RCSD1	Q6JBY9	416 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	SH2D4A	Q9H788	454 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	AGPAT5	Q9NUQ2	364 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ZNHIT6	Q9NWK9	470 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	TAOK2	Q9UL54	1235 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	COL14A1	Q05707	1796 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	hCG_1642624	A0A1W2PR95	340 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	MINDY4B	A8MYZ0	360 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	NUTM2E	B1AL46	878 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	SNAP23	O00161	211 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	IRAK1	P51617	712 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	NLRP5	P59047	1200 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	UBE4A	Q14139	1066 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	TSR1	Q2NL82	804 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	GLE1	Q53GS7	698 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	EMB	Q6PCB8	327 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	FAM76A	Q8TAV0	307 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	SECISBP2L	Q93073	1101 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	P2RX5	Q93086	422 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	GNL3L	Q9NVN8	582 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	SIK3	Q9Y2K2	1263 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	COL5A3	P25940	1745 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943		B4DLN1	442 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	IGHMBP2	P38935	993 aa	Known RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ORC2	Q13416	577 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	ASTE1	Q2TB18	679 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	CNNM4	Q6P4Q7	775 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	TADA2B	Q86TJ2	420 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	KAT14	Q9H8E8	782 aa		7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.5	□□□□□ -1.21
IFT80-223	ENST00000487943	GOLGA6B	A6NDN3	693 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	SRRM3	A6NNA2	597 aa	Predicted RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	RBAK-RBAKDN	I3L0D1	243 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	EIF3H	O15372	352 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	PHACTR2	O75167	634 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	CAMTA2	O94983	1202 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	INTS5	Q6P9B9	1019 aa	Known RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	KIAA1328	Q86T90	577 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	SMARCC1	Q92922	1105 aa	Predicted RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	CRACR2A	Q9BSW2	395 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	EDEM3	Q9BZQ6	932 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	PCDHA6	Q9UN73	950 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	PCDHA8	Q9Y5H6	950 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	ZNF185	O15231	689 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	VEGFA	P15692	232 aa	Predicted RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	KIF5B	P33176	963 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	GRM4	Q14833	912 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	SWT1	Q5T5J6	900 aa	Known RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	DTHD1	Q6ZMT9	781 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	CD302	Q8IX05	232 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	MREG	Q8N565	214 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	ATP8A2	Q9NTI2	1148 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TFR2	Q9UP52	801 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	DDX60L	Q5H9U9	1706 aa	Known RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	GOLGA6C	A6NDK9	693 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	EXOC5	O00471	708 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	GOLGA6D	P0CG33	693 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	IDE	P14735	1019 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TCP1	P17987	556 aa	Known RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TNNT3	P45378	269 aa	Predicted RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	EPHB4	P54760	987 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	KIF5A	Q12840	1032 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	ANKRD40	Q6AI12	368 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	CENPP	Q6IPU0	288 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	DGKH	Q86XP1	1220 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TRIM47	Q96LD4	638 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	CNOT6L	Q96LI5	555 aa	Known RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TRIM9	Q9C026	710 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	TCP11L1	Q9NUJ3	509 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	GOLGA6A	Q9NYA3	693 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	ARPP21	Q9UBL0	812 aa	Predicted RBP	7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	RNF14	Q9UBS8	474 aa		7.49	□□□□□ -1.21
IFT80-223	ENST00000487943	CCDC88A	Q3V6T2	1871 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	GUCY2C	P25092	1073 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	DYNLL1	P63167	89 aa	Known RBP	7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	APBA1	Q02410	837 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	C2orf54	Q08AI8	447 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	HAUS3	Q68CZ6	603 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	CCDC70	Q6NSX1	233 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	CSGALNACT2	Q8N6G5	542 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	SPATA4	Q8NEY3	305 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	RIN2	Q8WYP3	895 aa	Predicted RBP	7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	NSUN4	Q96CB9	384 aa	Known RBP	7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	TMEM60	Q9H2L4	133 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	GDF3	Q9NR23	364 aa		7.48	□□□□□ -1.21
IFT80-223	ENST00000487943	DUSP10	Q9Y6W6	482 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms