RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 COPRSQ9NQ92 184 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 TNKSO95271 1327 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 IL16Q14005 1332 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 ZNF292O60281 2723 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 MPHOSPH10O00566 681 aaKnown RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 DYNC1LI2O43237 492 aaPredicted RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 TBX10O75333 385 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 CSPG5O95196 566 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 SLC25A27O95847 323 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 HLA-DOAP06340 250 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 ZXDAP98168 799 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 DDX10Q13206 875 aaKnown RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 SMAD2Q15796 467 aaKnown RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 FSCN1Q16658 493 aaKnown RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 TLK2Q86UE8 772 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 MB21D1Q8N884 522 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 TGS1Q96RS0 853 aaKnown RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 OSBPL7Q9BZF2 842 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 EHD4Q9H223 541 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 VCPKMTQ9H867 229 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 CLDND1Q9NY35 253 aa7.18□□□□□ -1.26
COL4A3-206ENST00000487633 GREB1LQ9C091 1923 aaPredicted RBP7.18□□□□□ -1.26
COL4A3-206ENST00000487633 KIAA1671Q9BY89 1806 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 SPTBN2O15020 2390 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 NBNO60934 754 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 LGR5O75473 907 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 GJB5O95377 273 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 BAG3O95817 575 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 ZAP70P43403 619 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 TNFAIP2Q03169 654 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 COL9A2Q14055 689 aaPredicted RBP7.17□□□□□ -1.26
COL4A3-206ENST00000487633 FAM83BQ5T0W9 1011 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 SNRNP48Q6IEG0 339 aaKnown RBP7.17□□□□□ -1.26
COL4A3-206ENST00000487633 TAPT1Q6NXT6 567 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 FRMD5Q7Z6J6 570 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 RPAINQ86UA6 219 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 ADSSL1Q8N142 457 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 PABPC5Q96DU9 382 aaKnown RBP7.17□□□□□ -1.26
COL4A3-206ENST00000487633 FTOQ9C0B1 505 aaKnown RBP eCLIP7.17□□□□□ -1.26
COL4A3-206ENST00000487633 SMOC2Q9H3U7 446 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 ABHD16BQ9H3Z7 469 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 ANTXR1Q9H6X2 564 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 CABP5Q9NP86 173 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 PRKAG3Q9UGI9 489 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 PPP1R9AQ9ULJ8 1098 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 TMX2Q9Y320 296 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 FRYLO94915 3013 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 CHD6Q8TD26 2715 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 RALGAPA2Q2PPJ7 1873 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 MYH4Q9Y623 1939 aa7.17□□□□□ -1.26
COL4A3-206ENST00000487633 EP300Q09472 2414 aaPredicted RBP7.17□□□□□ -1.26
COL4A3-206ENST00000487633 CYP2D7A0A087X1C5 515 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 KIF28PB7ZC32 967 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 CYP7A1P22680 504 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 NBL1P41271 181 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 USP5P45974 858 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 HYAL1Q12794 435 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 MKRN4PQ13434 485 aaPredicted RBP7.16□□□□□ -1.26
COL4A3-206ENST00000487633 MBTPS1Q14703 1052 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 MVPQ14764 893 aaKnown RBP7.16□□□□□ -1.26
COL4A3-206ENST00000487633 CTC1Q2NKJ3 1217 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 SLFNL1Q499Z3 407 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 FBXO16Q8IX29 292 aaPredicted RBP7.16□□□□□ -1.26
COL4A3-206ENST00000487633 CPXCR1Q8N123 301 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 TMEM105Q8N8V8 129 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 BANK1Q8NDB2 785 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 FBXO22Q8NEZ5 403 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 DHX38Q92620 1227 aaKnown RBP7.16□□□□□ -1.26
COL4A3-206ENST00000487633 WNT8BQ93098 351 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 MRPL38Q96DV4 380 aaKnown RBP7.16□□□□□ -1.26
COL4A3-206ENST00000487633 DBNDD2Q9BQY9 259 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 RAVER2Q9HCJ3 691 aaKnown RBP7.16□□□□□ -1.26
COL4A3-206ENST00000487633 FBXO3Q9UK99 471 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 ACACBO00763 2458 aa7.16□□□□□ -1.26
COL4A3-206ENST00000487633 USP24Q9UPU5 2620 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 CEP250Q9BV73 2442 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 E9PSI1 815 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 STXBP3O00186 592 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 WDR46O15213 610 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 PFKMP08237 780 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 LINC00271P0C7V0 271 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 ACTN1P12814 892 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 EEF2P13639 858 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 PURAQ00577 322 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 NBPF20Q3BBV1 942 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 EPC2Q52LR7 807 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 TRAF7Q6Q0C0 670 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 NOL8Q76FK4 1167 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 SUGP1Q8IWZ8 645 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 MSL3Q8N5Y2 521 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 FAM133AQ8N9E0 248 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 SDR42E1Q8WUS8 393 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 DDX11Q96FC9 970 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 RAD9AQ99638 391 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 MEIS3Q99687 375 aa7.15□□□□□ -1.26
COL4A3-206ENST00000487633 RIOK1Q9BRS2 568 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 NOL10Q9BSC4 688 aaKnown RBP7.15□□□□□ -1.26
COL4A3-206ENST00000487633 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms