RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 INTS4Q96HW7 963 aaKnown RBP6.58□□□□□ -1.36
LINC00888-204ENST00000487386 NBPF4Q96M43 638 aa6.58□□□□□ -1.36
LINC00888-204ENST00000487386 MSRB2Q9Y3D2 182 aa6.58□□□□□ -1.36
LINC00888-204ENST00000487386 BACE2Q9Y5Z0 518 aa6.58□□□□□ -1.36
LINC00888-204ENST00000487386 TBX1O43435 398 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 PNLIPP16233 465 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 GALK1P51570 392 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 SV2CQ496J9 727 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 MPZL3Q6UWV2 235 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 NLGN2Q8NFZ4 835 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 SLC6A17Q9H1V8 727 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 NKX2-4Q9H2Z4 354 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 CYP26B1Q9NR63 512 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 TAF6LQ9Y6J9 622 aa6.57□□□□□ -1.36
LINC00888-204ENST00000487386 TBC1D8O95759 1140 aa6.56□□□□□ -1.36
LINC00888-204ENST00000487386 GTF2F1P35269 517 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC00888-204ENST00000487386 SIRT2Q8IXJ6 389 aa6.56□□□□□ -1.36
LINC00888-204ENST00000487386 PPP1R14AQ96A00 147 aa6.56□□□□□ -1.36
LINC00888-204ENST00000487386 SCG5P05408 212 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 PRKCAP17252 672 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 SEPHS1P49903 392 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 ERVFRD-1P60508 538 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 MVKQ03426 396 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 SERINC3Q13530 473 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 LAPTM5Q13571 262 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 ST13P5Q8NFI4 369 aaPredicted RBP6.55□□□□□ -1.36
LINC00888-204ENST00000487386 BTN2A2Q8WVV5 523 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 HIRIP3Q9BW71 556 aaPredicted RBP6.55□□□□□ -1.36
LINC00888-204ENST00000487386 TRIM55Q9BYV6 548 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 NSUN3Q9H649 340 aaKnown RBP6.55□□□□□ -1.36
LINC00888-204ENST00000487386 ZNF552Q9H707 407 aaPredicted RBP6.55□□□□□ -1.36
LINC00888-204ENST00000487386 IMPACTQ9P2X3 320 aa6.55□□□□□ -1.36
LINC00888-204ENST00000487386 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
LINC00888-204ENST00000487386 MSL3P1P0C860 447 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 HOXC12P31275 282 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 CORO7P57737 925 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 SCRN1Q12765 414 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 SF3A1Q15459 793 aaKnown RBP6.54□□□□□ -1.36
LINC00888-204ENST00000487386 JAMLQ86YT9 394 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 NPLOC4Q8TAT6 608 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
LINC00888-204ENST00000487386 FAM84AQ96KN4 292 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 DIRC2Q96SL1 478 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 CCDC113Q9H0I3 377 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 GPRC5CQ9NQ84 441 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 LRP2BPQ9P2M1 347 aa6.54□□□□□ -1.36
LINC00888-204ENST00000487386 TRBV23OR9-2A0A075B6M9 112 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 ARNTLO00327 626 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 THBDP07204 575 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 PAMP19021 973 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 L1CAMP32004 1257 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 CYP4F8P98187 520 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 NUP43Q8NFH3 380 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 FRS2Q8WU20 508 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 SREK1Q8WXA9 508 aaKnown RBP6.53□□□□□ -1.36
LINC00888-204ENST00000487386 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 MMP19Q99542 508 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 EPB41L4BQ9H329 900 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 TNFRSF12AQ9NP84 129 aa6.53□□□□□ -1.36
LINC00888-204ENST00000487386 NPHP3-ACAD11A0A0J9YXS1 232 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 OR14I1A6ND48 311 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 HRKO00198 91 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 PPP1R11O60927 126 aaPredicted RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 PLS3P13797 630 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 YBX1P67809 324 aaKnown RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 TESK1Q15569 626 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 SF1Q15637 639 aaKnown RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 ZNF648Q5T619 568 aaPredicted RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 FBXO15Q8NCQ5 510 aaPredicted RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 KREMEN2Q8NCW0 462 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 BHLHE22Q8NFJ8 381 aaPredicted RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
LINC00888-204ENST00000487386 PDLIM7Q9NR12 457 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 CLEC1BQ9P126 229 aa6.52□□□□□ -1.37
LINC00888-204ENST00000487386 MYOCOSA0A1B0GUC4 107 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 AGRPO00253 132 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 U2SURPO15042 1029 aaKnown RBP6.51□□□□□ -1.37
LINC00888-204ENST00000487386 PDPK1O15530 556 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 PEX10O60683 326 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 PDE6BP35913 854 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 ARL4AP40617 200 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 GRIA2P42262 883 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 GFRA1P56159 465 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 PPP2R2AP63151 447 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 RASGRF1Q13972 1273 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 CBX2Q14781 532 aaPredicted RBP6.51□□□□□ -1.37
LINC00888-204ENST00000487386 ADGRF1Q5T601 910 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 MBLAC2Q68D91 279 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 CPNE8Q86YQ8 564 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
LINC00888-204ENST00000487386 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
LINC00888-204ENST00000487386 C7orf72A4D263 438 aa6.5□□□□□ -1.37
LINC00888-204ENST00000487386 CPP00450 1065 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms