RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 MTUS1Q9ULD2 1270 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 PTPRCP08575 1304 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 GJB5O95377 273 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 NBL1P41271 181 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 NUBP1P53384 320 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 VCPP55072 806 aaKnown RBP14.25□□□□□ -0.13
TRIM56-204ENST00000487252 TNFAIP2Q03169 654 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 TMCO2Q7Z6W1 182 aaPredicted RBP14.25□□□□□ -0.13
TRIM56-204ENST00000487252 TLK2Q86UE8 772 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 DDX11Q96FC9 970 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 RAD9AQ99638 391 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 PPP1R9AQ9ULJ8 1098 aa14.25□□□□□ -0.13
TRIM56-204ENST00000487252 UQCRFS1P1P0C7P4 283 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 AVPR2P30518 371 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 ZXDAP98168 799 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 GPNMBQ14956 572 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 CTC1Q2NKJ3 1217 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 TIGD5Q53EQ6 642 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 CERS3Q8IU89 383 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 CCDC144CPQ8IYA2 1237 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 RIPK3Q9Y572 518 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 ACACBO00763 2458 aa14.24□□□□□ -0.13
TRIM56-204ENST00000487252 SOWAHBA6NEL2 793 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 ZEB2O60315 1214 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 CYP2E1P05181 493 aaPredicted RBP14.23□□□□□ -0.13
TRIM56-204ENST00000487252 KCNJ6P48051 423 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 DEFB103AP81534 67 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 TMEM179Q6ZVK1 233 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
TRIM56-204ENST00000487252 BANK1Q8NDB2 785 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRIM56-204ENST00000487252 TEX13BQ9BXU2 312 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 FTOQ9C0B1 505 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRIM56-204ENST00000487252 Q9Y3F1 56 aa14.23□□□□□ -0.13
TRIM56-204ENST00000487252 PKD1L2Q7Z442 2459 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 H0Y858 1186 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 ATP2A1O14983 1001 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 MBTPS2O43462 519 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 PTGS1P23219 599 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 USP5P45974 858 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 TCEAL5Q5H9L2 206 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 FBXO22Q8NEZ5 403 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 ASIC4Q96FT7 647 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
TRIM56-204ENST00000487252 TLR9Q9NR96 1032 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
TRIM56-204ENST00000487252 NAV1Q8NEY1 1877 aa14.22□□□□□ -0.13
TRIM56-204ENST00000487252 MPHOSPH10O00566 681 aaKnown RBP14.21□□□□□ -0.13
TRIM56-204ENST00000487252 SMPD1P17405 629 aa14.21□□□□□ -0.13
TRIM56-204ENST00000487252 PTPROQ16827 1216 aa14.21□□□□□ -0.13
TRIM56-204ENST00000487252 GORABQ5T7V8 394 aa14.21□□□□□ -0.13
TRIM56-204ENST00000487252 C17orf80Q9BSJ5 609 aa14.21□□□□□ -0.13
TRIM56-204ENST00000487252 SH2D4AQ9H788 454 aa14.21□□□□□ -0.13
TRIM56-204ENST00000487252 ARHGEF10LQ9HCE6 1279 aa14.21□□□□□ -0.13
TRIM56-204ENST00000487252 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.14
TRIM56-204ENST00000487252 MYO7AQ13402 2215 aa14.21□□□□□ -0.14
TRIM56-204ENST00000487252 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
TRIM56-204ENST00000487252 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
TRIM56-204ENST00000487252 NCK2O43639 380 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 UBTFL1P0CB47 393 aaPredicted RBP14.2□□□□□ -0.14
TRIM56-204ENST00000487252 EVX2Q03828 476 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 SIGLEC14Q08ET2 396 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 LRRFIP1Q32MZ4 808 aaKnown RBP14.2□□□□□ -0.14
TRIM56-204ENST00000487252 SNRNP48Q6IEG0 339 aaKnown RBP14.2□□□□□ -0.14
TRIM56-204ENST00000487252 CLEC10AQ8IUN9 316 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 CNTNAP3BQ96NU0 1288 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 CNTNAP3Q9BZ76 1288 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 AP5M1Q9H0R1 490 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 SNRKQ9NRH2 765 aa14.2□□□□□ -0.14
TRIM56-204ENST00000487252 GALR2O43603 387 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-204ENST00000487252 ICA1Q05084 483 aa14.19□□□□□ -0.14
TRIM56-204ENST00000487252 CBX2Q14781 532 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-204ENST00000487252 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
TRIM56-204ENST00000487252 RETREG2Q8NC44 543 aa14.19□□□□□ -0.14
TRIM56-204ENST00000487252 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-204ENST00000487252 NSUN3Q9H649 340 aaKnown RBP14.19□□□□□ -0.14
TRIM56-204ENST00000487252 PIH1D3Q9NQM4 214 aaKnown RBP14.19□□□□□ -0.14
TRIM56-204ENST00000487252 CLDND1Q9NY35 253 aa14.19□□□□□ -0.14
TRIM56-204ENST00000487252 ATRXP46100 2492 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 MYH8P13535 1937 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 LOC730098B7Z3J9 87 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 H3BNC9 293 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 STXBP3O00186 592 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 CXCL10P02778 98 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 CYP7A1P22680 504 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 PURAQ00577 322 aaKnown RBP14.18□□□□□ -0.14
TRIM56-204ENST00000487252 DLX2Q07687 328 aaPredicted RBP14.18□□□□□ -0.14
TRIM56-204ENST00000487252 SMAD4Q13485 552 aaKnown RBP14.18□□□□□ -0.14
TRIM56-204ENST00000487252 BFSP2Q13515 415 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 RPAINQ86UA6 219 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 FAM133AQ8N9E0 248 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 MIGA1Q8NAN2 632 aa14.18□□□□□ -0.14
TRIM56-204ENST00000487252 ABHD14A-ACY1A0A1B0GW23 586 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms