RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CLTBP09497 229 aa28.91■■■□□ 2.22
LIME1-206ENST00000487026 C9orf50Q5SZB4 431 aa28.91■■■□□ 2.22
LIME1-206ENST00000487026 NUP133Q8WUM0 1156 aa28.91■■■□□ 2.22
LIME1-206ENST00000487026 NEDD4P46934 1319 aa28.91■■■□□ 2.22
LIME1-206ENST00000487026 MOXD2PA6NHM9 499 aa28.9■■■□□ 2.22
LIME1-206ENST00000487026 ASB14A6NK59 587 aa28.9■■■□□ 2.22
LIME1-206ENST00000487026 ZNF213O14771 459 aa28.9■■■□□ 2.22
LIME1-206ENST00000487026 GJA9P57773 515 aa28.9■■■□□ 2.22
LIME1-206ENST00000487026 SPC25Q9HBM1 224 aa28.9■■■□□ 2.22
LIME1-206ENST00000487026 ASGR1P07306 291 aa28.89■■■□□ 2.22
LIME1-206ENST00000487026 PDHBP11177 359 aa28.89■■■□□ 2.22
LIME1-206ENST00000487026 GNASQ5JWF2 1037 aa28.89■■■□□ 2.22
LIME1-206ENST00000487026 NOL8Q76FK4 1167 aaKnown RBP28.89■■■□□ 2.22
LIME1-206ENST00000487026 VTI1AQ96AJ9 217 aa28.89■■■□□ 2.22
LIME1-206ENST00000487026 TTC14Q96N46 770 aa28.89■■■□□ 2.22
LIME1-206ENST00000487026 UPF3AQ9H1J1 476 aaKnown RBP28.89■■■□□ 2.22
LIME1-206ENST00000487026 RNF41Q9H4P4 317 aaPredicted RBP28.89■■■□□ 2.22
LIME1-206ENST00000487026 TMEM39AQ9NV64 488 aa28.89■■■□□ 2.22
LIME1-206ENST00000487026 PCP11498 1178 aaKnown RBP28.88■■■□□ 2.21
LIME1-206ENST00000487026 PTGS1P23219 599 aa28.88■■■□□ 2.21
LIME1-206ENST00000487026 CST5P28325 142 aaPredicted RBP28.88■■■□□ 2.21
LIME1-206ENST00000487026 TNFAIP2Q03169 654 aa28.88■■■□□ 2.21
LIME1-206ENST00000487026 FAAP100Q0VG06 881 aa28.88■■■□□ 2.21
LIME1-206ENST00000487026 EEPD1Q7L9B9 569 aa28.88■■■□□ 2.21
LIME1-206ENST00000487026 PCSK9Q8NBP7 692 aaKnown RBP28.88■■■□□ 2.21
LIME1-206ENST00000487026 ESR2Q92731 530 aa28.88■■■□□ 2.21
LIME1-206ENST00000487026 LAMA2P24043 3122 aaKnown RBP28.88■■■□□ 2.21
LIME1-206ENST00000487026 CTAGE5O15320 804 aa28.87■■■□□ 2.21
LIME1-206ENST00000487026 BEX3Q00994 111 aa28.87■■■□□ 2.21
LIME1-206ENST00000487026 BAATQ14032 418 aaPredicted RBP28.87■■■□□ 2.21
LIME1-206ENST00000487026 GLT1D1Q96MS3 346 aa28.87■■■□□ 2.21
LIME1-206ENST00000487026 PDGFCQ9NRA1 345 aa28.87■■■□□ 2.21
LIME1-206ENST00000487026 MTMR10Q9NXD2 777 aa28.87■■■□□ 2.21
LIME1-206ENST00000487026 DCDC2CA8MYV0 355 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 NFIBO00712 420 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 KIAA0355O15063 1070 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 RAG1P15918 1043 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 ZNF543Q08ER8 600 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 ANKRD33Q7Z3H0 272 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 COL6A3P12111 3177 aa28.86■■■□□ 2.21
LIME1-206ENST00000487026 HIP1O00291 1037 aa28.85■■■□□ 2.21
LIME1-206ENST00000487026 KDM4AO75164 1064 aa28.85■■■□□ 2.21
LIME1-206ENST00000487026 TMEM63BQ5T3F8 832 aa28.85■■■□□ 2.21
LIME1-206ENST00000487026 FBXO16Q8IX29 292 aaPredicted RBP28.85■■■□□ 2.21
LIME1-206ENST00000487026 TOX2Q96NM4 488 aa28.85■■■□□ 2.21
LIME1-206ENST00000487026 GOLGA8HP0CJ92 632 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 SNHG28P0DPA3 235 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 SMPD1P17405 629 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 PDE4AP27815 886 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 EPHB4P54760 987 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 TAPT1Q6NXT6 567 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 CPVLQ9H3G5 476 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 ELP1O95163 1332 aa28.84■■■□□ 2.21
LIME1-206ENST00000487026 PTPDC1A2A3K4 754 aa28.83■■■□□ 2.21
LIME1-206ENST00000487026 CDK7P50613 346 aa28.83■■■□□ 2.21
LIME1-206ENST00000487026 IRX6P78412 446 aaPredicted RBP28.83■■■□□ 2.21
LIME1-206ENST00000487026 GNEQ9Y223 722 aaKnown RBP28.83■■■□□ 2.21
LIME1-206ENST00000487026 B4E1Z4 1266 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 DYNC1LI2O43237 492 aaPredicted RBP28.82■■■□□ 2.2
LIME1-206ENST00000487026 DGKHQ86XP1 1220 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 CLEC4DQ8WXI8 215 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 FAM161BQ96MY7 647 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 DSCC1Q9BVC3 393 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 UBA5Q9GZZ9 404 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 IL25Q9H293 177 aa28.82■■■□□ 2.2
LIME1-206ENST00000487026 LCTP09848 1927 aa28.81■■■□□ 2.2
LIME1-206ENST00000487026 IQSEC1Q6DN90 963 aa28.81■■■□□ 2.2
LIME1-206ENST00000487026 TLK2Q86UE8 772 aa28.81■■■□□ 2.2
LIME1-206ENST00000487026 AP5M1Q9H0R1 490 aa28.81■■■□□ 2.2
LIME1-206ENST00000487026 A0A0U1RQG5 324 aaPredicted RBP28.8■■■□□ 2.2
LIME1-206ENST00000487026 ARVCFO00192 962 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 CALML3P27482 149 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 NKX3-2P78367 333 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 CXCL17Q6UXB2 119 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 SLC30A10Q6XR72 485 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 KIAA1211Q6ZU35 1233 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 PNMA1Q8ND90 353 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 SLC17A8Q8NDX2 589 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 MORC4Q8TE76 937 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 ZSWIM5Q9P217 1185 aa28.8■■■□□ 2.2
LIME1-206ENST00000487026 ALDH5A1P51649 535 aaPredicted RBP28.79■■■□□ 2.2
LIME1-206ENST00000487026 FPGSQ05932 587 aa28.79■■■□□ 2.2
LIME1-206ENST00000487026 FSCN1Q16658 493 aaKnown RBP28.79■■■□□ 2.2
LIME1-206ENST00000487026 IMMTQ16891 758 aaKnown RBP28.79■■■□□ 2.2
LIME1-206ENST00000487026 IQCA1Q86XH1 822 aa28.79■■■□□ 2.2
LIME1-206ENST00000487026 ZSCAN10Q96SZ4 725 aaPredicted RBP28.79■■■□□ 2.2
LIME1-206ENST00000487026 VTA1Q9NP79 307 aa28.79■■■□□ 2.2
LIME1-206ENST00000487026 ADD3Q9UEY8 706 aaKnown RBP28.79■■■□□ 2.2
LIME1-206ENST00000487026 TBX21Q9UL17 535 aa28.79■■■□□ 2.2
LIME1-206ENST00000487026 MROH7Q68CQ1 1323 aa28.78■■■□□ 2.2
LIME1-206ENST00000487026 GSPT1P15170 499 aaKnown RBP28.78■■■□□ 2.2
LIME1-206ENST00000487026 GPATCH4Q5T3I0 446 aaKnown RBP28.78■■■□□ 2.2
LIME1-206ENST00000487026 FAM109BQ6ICB4 259 aaPredicted RBP28.78■■■□□ 2.2
LIME1-206ENST00000487026 RNF207Q6ZRF8 634 aa28.78■■■□□ 2.2
LIME1-206ENST00000487026 KAT14Q9H8E8 782 aa28.78■■■□□ 2.2
LIME1-206ENST00000487026 CTNNA3Q9UI47 895 aa28.78■■■□□ 2.2
LIME1-206ENST00000487026 LRRC37A2A6NM11 1700 aa28.77■■■□□ 2.2
LIME1-206ENST00000487026 TIMP1P01033 207 aa28.77■■■□□ 2.2
LIME1-206ENST00000487026 USH1GQ495M9 461 aa28.77■■■□□ 2.2
LIME1-206ENST00000487026 CCDC178Q5BJE1 867 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms