RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.04
NR1H3-223ENST00000486991 RIPK3Q9Y572 518 aa15.27■□□□□ 0.04
NR1H3-223ENST00000486991 CUL9Q8IWT3 2517 aa15.27■□□□□ 0.03
NR1H3-223ENST00000486991 MYH6P13533 1939 aa15.27■□□□□ 0.03
NR1H3-223ENST00000486991 LRRC37A2A6NM11 1700 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 ERICH2A1L162 156 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 IFIT3O14879 490 aaKnown RBP15.26■□□□□ 0.03
NR1H3-223ENST00000486991 ATP2A1O14983 1001 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 EXOSC10Q01780 885 aaKnown RBP15.26■□□□□ 0.03
NR1H3-223ENST00000486991 TLE2Q04725 743 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 SART3Q15020 963 aaKnown RBP15.26■□□□□ 0.03
NR1H3-223ENST00000486991 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 PRPF38AQ8NAV1 312 aaKnown RBP15.26■□□□□ 0.03
NR1H3-223ENST00000486991 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
NR1H3-223ENST00000486991 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 XPNPEP3Q9NQH7 507 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 TCP11L1Q9NUJ3 509 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 CTDP1Q9Y5B0 961 aaPredicted RBP15.26■□□□□ 0.03
NR1H3-223ENST00000486991 PRUNE2Q8WUY3 3088 aa15.26■□□□□ 0.03
NR1H3-223ENST00000486991 TNKSO95271 1327 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 BMP3P12645 472 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 STAT3P40763 770 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 EPHB4P54760 987 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
NR1H3-223ENST00000486991 SNX17Q15036 470 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 TMEM67Q5HYA8 995 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 FAM109BQ6ICB4 259 aaPredicted RBP15.25■□□□□ 0.03
NR1H3-223ENST00000486991 Q6ZUG5 572 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.25■□□□□ 0.03
NR1H3-223ENST00000486991 TMEM87BQ96K49 555 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 FEM1BQ9UK73 627 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 STX8Q9UNK0 236 aa15.25■□□□□ 0.03
NR1H3-223ENST00000486991 ZNF536O15090 1300 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 WDR19Q8NEZ3 1342 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 PLA2G6O60733 806 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 ZNF865P0CJ78 1059 aaPredicted RBP15.24■□□□□ 0.03
NR1H3-223ENST00000486991 WTAPQ15007 396 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 TMEM47Q9BQJ4 181 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 TINF2Q9BSI4 451 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 COL25A1Q9BXS0 654 aaPredicted RBP15.24■□□□□ 0.03
NR1H3-223ENST00000486991 TEX13BQ9BXU2 312 aa15.24■□□□□ 0.03
NR1H3-223ENST00000486991 GPHNQ9NQX3 736 aaPredicted RBP15.24■□□□□ 0.03
NR1H3-223ENST00000486991 TMEM232C9JQI7 657 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 SH2B2O14492 632 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-223ENST00000486991 FDX1P10109 184 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 RARBP10826 455 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 KCTD2Q14681 263 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 IFIT1BQ5T764 474 aaKnown RBP15.23■□□□□ 0.03
NR1H3-223ENST00000486991 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 SNRNP48Q6IEG0 339 aaKnown RBP15.23■□□□□ 0.03
NR1H3-223ENST00000486991 NFXL1Q6ZNB6 911 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 NOL8Q76FK4 1167 aaKnown RBP15.23■□□□□ 0.03
NR1H3-223ENST00000486991 ENAHQ8N8S7 591 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-223ENST00000486991 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 KIFC2Q96AC6 838 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 CHMP4CQ96CF2 233 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 TTC14Q96N46 770 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 CDX2Q99626 313 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-223ENST00000486991 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 TSHZ2Q9NRE2 1034 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 PHF24Q9UPV7 400 aa15.23■□□□□ 0.03
NR1H3-223ENST00000486991 BAZ2BQ9UIF8 2168 aaKnown RBP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 DNAJC25-GNG10A0A024R161 153 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 A0A1W2PQ45 241 aaPredicted RBP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 A0A1W2PQY0 241 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 ST18O60284 1047 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 PQBP1O60828 265 aaKnown RBP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 ZBED4O75132 1171 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 TOP1P11387 765 aaKnown RBP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 SLC1A4P43007 532 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 STAT2P52630 851 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 AK2P54819 239 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 SEC23AQ15436 765 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 MYLIPQ8WY64 445 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 BRF1Q92994 677 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 FGD4Q96M96 766 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 MTA3Q9BTC8 594 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 TTYH1Q9H313 450 aaPredicted RBP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
NR1H3-223ENST00000486991 RAVER2Q9HCJ3 691 aaKnown RBP15.22■□□□□ 0.03
NR1H3-223ENST00000486991 MYADML2A6NDP7 307 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 SNAI1O95863 264 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-223ENST00000486991 SNHG28P0DPA3 235 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 OAZ1P54368 228 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 TOB2Q14106 344 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-223ENST00000486991 ANKRD1Q15327 319 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 BTNL9Q6UXG8 535 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 DGKHQ86XP1 1220 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 LARP6Q9BRS8 491 aaKnown RBP15.21■□□□□ 0.03
NR1H3-223ENST00000486991 KAT14Q9H8E8 782 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 SENP2Q9HC62 589 aa15.21■□□□□ 0.03
NR1H3-223ENST00000486991 NAP1L2Q9ULW6 460 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-223ENST00000486991 CDH23Q9H251 3354 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms