RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 CYP2C18P33260 490 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 RAB30Q15771 203 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 CXCL17Q6UXB2 119 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 HERVK_113Q902F9 699 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 TRERF1Q96PN7 1200 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 SEZ6LQ9BYH1 1024 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 MSRAQ9UJ68 235 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 GNEQ9Y223 722 aaKnown RBP23.8■■□□□ 1.4
PHF1-208ENST00000486845 ASTN1O14525 1302 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 ZEB2O60315 1214 aa23.79■■□□□ 1.4
PHF1-208ENST00000486845 PLA2G6O60733 806 aa23.79■■□□□ 1.4
PHF1-208ENST00000486845 ALAS1P13196 640 aa23.79■■□□□ 1.4
PHF1-208ENST00000486845 PPARAQ07869 468 aa23.79■■□□□ 1.4
PHF1-208ENST00000486845 FSCN1Q16658 493 aaKnown RBP23.79■■□□□ 1.4
PHF1-208ENST00000486845 AKNAD1Q5T1N1 836 aa23.79■■□□□ 1.4
PHF1-208ENST00000486845 HIPK3Q9H422 1215 aa23.79■■□□□ 1.4
PHF1-208ENST00000486845 MCCP23508 829 aa23.78■■□□□ 1.4
PHF1-208ENST00000486845 ITGA7Q13683 1181 aa23.78■■□□□ 1.4
PHF1-208ENST00000486845 SEC62Q99442 399 aaKnown RBP23.78■■□□□ 1.4
PHF1-208ENST00000486845 PRDM12Q9H4Q4 367 aa23.78■■□□□ 1.4
PHF1-208ENST00000486845 TTC41PQ6P2S7 1318 aa23.78■■□□□ 1.4
PHF1-208ENST00000486845 MYO9BQ13459 2157 aa23.77■■□□□ 1.4
PHF1-208ENST00000486845 ERC2O15083 957 aa23.77■■□□□ 1.4
PHF1-208ENST00000486845 FGBP02675 491 aa23.77■■□□□ 1.4
PHF1-208ENST00000486845 DYNC1LI2O43237 492 aaPredicted RBP23.76■■□□□ 1.39
PHF1-208ENST00000486845 SMPD1P17405 629 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 ZMYM1Q5SVZ6 1142 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 IQSEC1Q6DN90 963 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 RCSD1Q6JBY9 416 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 KCTD1Q719H9 257 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 PPM1EQ8WY54 764 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 FSD1Q9BTV5 496 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 CYP39A1Q9NYL5 469 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 STX8Q9UNK0 236 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 Q9Y3F1 56 aa23.76■■□□□ 1.39
PHF1-208ENST00000486845 TSPY2A6NKD2 308 aa23.75■■□□□ 1.39
PHF1-208ENST00000486845 TNFRSF10AO00220 468 aa23.75■■□□□ 1.39
PHF1-208ENST00000486845 ATXN2LQ8WWM7 1075 aaKnown RBP23.75■■□□□ 1.39
PHF1-208ENST00000486845 CHMP4CQ96CF2 233 aa23.75■■□□□ 1.39
PHF1-208ENST00000486845 VTA1Q9NP79 307 aa23.75■■□□□ 1.39
PHF1-208ENST00000486845 CXXC1Q9P0U4 656 aaPredicted RBP23.75■■□□□ 1.39
PHF1-208ENST00000486845 PRR12Q9ULL5 1215 aa23.75■■□□□ 1.39
PHF1-208ENST00000486845 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.75■■□□□ 1.39
PHF1-208ENST00000486845 CHD9Q3L8U1 2897 aa23.75■■□□□ 1.39
PHF1-208ENST00000486845 TAPT1Q6NXT6 567 aa23.74■■□□□ 1.39
PHF1-208ENST00000486845 FBXO16Q8IX29 292 aaPredicted RBP23.74■■□□□ 1.39
PHF1-208ENST00000486845 NOC4LQ9BVI4 516 aaKnown RBP23.74■■□□□ 1.39
PHF1-208ENST00000486845 PDGFCQ9NRA1 345 aa23.74■■□□□ 1.39
PHF1-208ENST00000486845 THEGQ9P2T0 379 aa23.74■■□□□ 1.39
PHF1-208ENST00000486845 CCPG1Q9ULG6 757 aa23.74■■□□□ 1.39
PHF1-208ENST00000486845 GRIN2DO15399 1336 aa23.74■■□□□ 1.39
PHF1-208ENST00000486845 UMODL1Q5DID0 1318 aa23.74■■□□□ 1.39
PHF1-208ENST00000486845 CCL23P55773 120 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 MUM1L1Q5H9M0 696 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 NSMFQ6X4W1 530 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 EEPD1Q7L9B9 569 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 PI4K2BQ8TCG2 481 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 TRPV6Q9H1D0 765 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 NKX2-4Q9H2Z4 354 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 SLC28A3Q9HAS3 691 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 GBF1Q92538 1859 aa23.73■■□□□ 1.39
PHF1-208ENST00000486845 B4GALT4O60513 344 aa23.72■■□□□ 1.39
PHF1-208ENST00000486845 SNAP25P60880 206 aa23.72■■□□□ 1.39
PHF1-208ENST00000486845 ADGRE1Q14246 886 aa23.72■■□□□ 1.39
PHF1-208ENST00000486845 OTOP2Q7RTS6 562 aa23.72■■□□□ 1.39
PHF1-208ENST00000486845 RPUSD2Q8IZ73 545 aaKnown RBP23.72■■□□□ 1.39
PHF1-208ENST00000486845 DDX49Q9Y6V7 483 aaKnown RBP23.72■■□□□ 1.39
PHF1-208ENST00000486845 ICAM1P05362 532 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 IGFBP4P22692 258 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 PTGS1P23219 599 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 CTDSPL2Q05D32 466 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 KIAA1211Q6ZU35 1233 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 MORC4Q8TE76 937 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 DCAF4Q8WV16 495 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 WNT8AQ9H1J5 351 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 IL17RBQ9NRM6 502 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 YBX2Q9Y2T7 364 aaKnown RBP23.71■■□□□ 1.39
PHF1-208ENST00000486845 LCTP09848 1927 aa23.71■■□□□ 1.39
PHF1-208ENST00000486845 NMT2O60551 498 aa23.7■■□□□ 1.38
PHF1-208ENST00000486845 PSMC6P62333 389 aa23.7■■□□□ 1.38
PHF1-208ENST00000486845 CCDC96Q2M329 555 aa23.7■■□□□ 1.38
PHF1-208ENST00000486845 ASB2Q96Q27 587 aa23.7■■□□□ 1.38
PHF1-208ENST00000486845 ADD3Q9UEY8 706 aaKnown RBP23.7■■□□□ 1.38
PHF1-208ENST00000486845 SLC4A7Q9Y6M7 1214 aa23.7■■□□□ 1.38
PHF1-208ENST00000486845 LOC102724159A0A0B4J2E5 919 aa23.69■■□□□ 1.38
PHF1-208ENST00000486845 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
PHF1-208ENST00000486845 MRPS5P82675 430 aaKnown RBP23.69■■□□□ 1.38
PHF1-208ENST00000486845 PWP2Q15269 919 aaKnown RBP23.69■■□□□ 1.38
PHF1-208ENST00000486845 DUSP28Q4G0W2 176 aa23.69■■□□□ 1.38
PHF1-208ENST00000486845 RASGRP2Q7LDG7 609 aa23.69■■□□□ 1.38
PHF1-208ENST00000486845 ALDH8A1Q9H2A2 487 aaPredicted RBP23.69■■□□□ 1.38
PHF1-208ENST00000486845 RANBP17Q9H2T7 1088 aaKnown RBP23.69■■□□□ 1.38
PHF1-208ENST00000486845 POLR3EQ9NVU0 708 aa23.69■■□□□ 1.38
PHF1-208ENST00000486845 ANAPC4Q9UJX5 808 aa23.69■■□□□ 1.38
PHF1-208ENST00000486845 MTMR7Q9Y216 660 aa23.69■■□□□ 1.38
PHF1-208ENST00000486845 FOXP2O15409 715 aa23.68■■□□□ 1.38
PHF1-208ENST00000486845 SUPT20HL2P0C7V6 817 aa23.68■■□□□ 1.38
PHF1-208ENST00000486845 NOVP48745 357 aa23.68■■□□□ 1.38
PHF1-208ENST00000486845 CCDC85BQ15834 202 aaPredicted RBP23.68■■□□□ 1.38
PHF1-208ENST00000486845 TMEM63BQ5T3F8 832 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms