RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CNGA1P29973 690 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 KIF5BP33176 963 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 EXOSC10Q01780 885 aaKnown RBP21.18■□□□□ 0.98
COL1A1-207ENST00000486572 CNTN2Q02246 1040 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 USH1GQ495M9 461 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 MAMDC4Q6UXC1 1216 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 SGMS1Q86VZ5 419 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 FAM133AQ8N9E0 248 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 FGD4Q96M96 766 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 SYNGAP1Q96PV0 1343 aa21.18■□□□□ 0.98
COL1A1-207ENST00000486572 MSCO60682 206 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 CALM1P0DP23 149 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 CALM2P0DP24 149 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 CALM3P0DP25 149 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 CLEC4DQ8WXI8 215 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 TCEANC2Q96MN5 208 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 JAKMIP1Q96N16 626 aaKnown RBP21.17■□□□□ 0.98
COL1A1-207ENST00000486572 USP26Q9BXU7 913 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 DDX20Q9UHI6 824 aaKnown RBP21.17■□□□□ 0.98
COL1A1-207ENST00000486572 CNPY2Q9Y2B0 182 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 SLC12A7Q9Y666 1083 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 ABCB11O95342 1321 aa21.17■□□□□ 0.98
COL1A1-207ENST00000486572 SMCHD1A6NHR9 2005 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 FARP2O94887 1054 aaPredicted RBP21.16■□□□□ 0.98
COL1A1-207ENST00000486572 PRAMEF19Q5SWL8 479 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 LHX8Q68G74 356 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 FBXO11Q86XK2 927 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 ANKLE1Q8NAG6 615 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 MTMR8Q96EF0 704 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 RIOX1Q9H6W3 641 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 OGDHLQ9ULD0 1010 aa21.16■□□□□ 0.98
COL1A1-207ENST00000486572 FRMPD3Q5JV73 1810 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 ZBTB5O15062 677 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 SEPT4O43236 478 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 BAATQ14032 418 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-207ENST00000486572 SLC35G1Q2M3R5 365 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 BLOC1S2Q6QNY1 142 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 UBE2Q1Q7Z7E8 422 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 AMNQ9BXJ7 453 aa21.15■□□□□ 0.98
COL1A1-207ENST00000486572 SOWAHBA6NEL2 793 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 CYTH3O43739 400 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 PSMA5P28066 241 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 GNAQP50148 359 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 SLC30A10Q6XR72 485 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 SYNE3Q6ZMZ3 975 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 RNF207Q6ZRF8 634 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 HOMER1Q86YM7 354 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 LCTP09848 1927 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 MYH6P13533 1939 aa21.14■□□□□ 0.97
COL1A1-207ENST00000486572 ASTN1O14525 1302 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 ASB14A6NK59 587 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 SNAI1O95863 264 aaPredicted RBP21.13■□□□□ 0.97
COL1A1-207ENST00000486572 CPA1P15085 419 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 RXRAP19793 462 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 FGD1P98174 961 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 APOA5Q6Q788 366 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 MICU3Q86XE3 530 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 CCDC144CPQ8IYA2 1237 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 RGS22Q8NE09 1264 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 PIGSQ96S52 555 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 LZTS2Q9BRK4 669 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 SPZ1Q9BXG8 430 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 MAF1Q9H063 256 aa21.13■□□□□ 0.97
COL1A1-207ENST00000486572 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.13■□□□□ 0.97
COL1A1-207ENST00000486572 MRPL11Q9Y3B7 192 aaKnown RBP21.13■□□□□ 0.97
COL1A1-207ENST00000486572 PPP1R11O60927 126 aaPredicted RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 ZNF865P0CJ78 1059 aaPredicted RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 CASTP20810 708 aaKnown RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 CALML3P27482 149 aa21.12■□□□□ 0.97
COL1A1-207ENST00000486572 SMARCA1P28370 1054 aa21.12■□□□□ 0.97
COL1A1-207ENST00000486572 RPS6P62753 249 aaKnown RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 TRAF1Q13077 416 aa21.12■□□□□ 0.97
COL1A1-207ENST00000486572 RAB11FIP4Q86YS3 637 aa21.12■□□□□ 0.97
COL1A1-207ENST00000486572 FANCBQ8NB91 859 aa21.12■□□□□ 0.97
COL1A1-207ENST00000486572 ABHD16BQ9H3Z7 469 aa21.12■□□□□ 0.97
COL1A1-207ENST00000486572 ADD3Q9UEY8 706 aaKnown RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 ZHX1Q9UKY1 873 aaPredicted RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 TNRC18O15417 2968 aaPredicted RBP21.12■□□□□ 0.97
COL1A1-207ENST00000486572 PNMA6FA0A0J9YX94 578 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 EIF5BO60841 1220 aaKnown RBP21.11■□□□□ 0.97
COL1A1-207ENST00000486572 PLEKHA8P1O95397 391 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 AKR1A1P14550 325 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 RPS6KB1P23443 525 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 MCF2L2Q86YR7 1114 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 DIS3LQ8TF46 1054 aaKnown RBP21.11■□□□□ 0.97
COL1A1-207ENST00000486572 PURBQ96QR8 312 aaKnown RBP21.11■□□□□ 0.97
COL1A1-207ENST00000486572 BRPF3Q9ULD4 1205 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 PCDHA1Q9Y5I3 950 aa21.11■□□□□ 0.97
COL1A1-207ENST00000486572 LRRC37A2A6NM11 1700 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 LOC102724159A0A0B4J2E5 919 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 KLF18A0A0U1RQI7 1052 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 ZBTB43O43298 467 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 ALDH5A1P51649 535 aaPredicted RBP21.1■□□□□ 0.97
COL1A1-207ENST00000486572 ACVR2BQ13705 512 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 PWP2Q15269 919 aaKnown RBP21.1■□□□□ 0.97
COL1A1-207ENST00000486572 ANO1Q5XXA6 986 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 Q6ZUG5 572 aa21.1■□□□□ 0.97
COL1A1-207ENST00000486572 RRP36Q96EU6 259 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms