RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 AKR1A1P14550 325 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 CLCN6P51797 869 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 ANAPC15P60006 121 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 KCNA10Q16322 511 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 TTBK2Q6IQ55 1244 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 CCDC174Q6PII3 467 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 MAMDC4Q6UXC1 1216 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 RILPL2Q969X0 211 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 IL17RAQ96F46 866 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 PRKAG2Q9UGJ0 569 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 FEM1BQ9UK73 627 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 PLIN4Q96Q06 1357 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 LCTP09848 1927 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 ATP2A1O14983 1001 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 CTAGE5O15320 804 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 SLC16A2P36021 539 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 ACLYP53396 1101 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 BEX3Q00994 111 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 FAAP100Q0VG06 881 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 CCDC144BQ3MJ40 725 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 RNF180Q86T96 592 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 ZNF589Q86UQ0 364 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 CCDC144CPQ8IYA2 1237 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 GMCL1P1Q8NEA9 526 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 NRBP1Q9UHY1 535 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 CNPY2Q9Y2B0 182 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
TMEM39A-208ENST00000486159 RANBP6O60518 1105 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 CLTBP09497 229 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 HAND2P61296 217 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 PDE4BQ07343 736 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 C1orf53Q5VUE5 145 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 STAG1Q8WVM7 1258 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 NACAP1Q9BZK3 213 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 TTYH1Q9H313 450 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 PDGFCQ9NRA1 345 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 RNF146Q9NTX7 359 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 RAD50Q92878 1312 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 SYNGAP1Q96PV0 1343 aa11.03□□□□□ -0.64
TMEM39A-208ENST00000486159 TSPY2A6NKD2 308 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 DUSP11O75319 330 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 FGAP02671 866 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 ASGR1P07306 291 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 C6orf222P0C671 652 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 ALAS1P13196 640 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 COPB2P35606 906 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 SLC1A4P43007 532 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 IKQ13123 557 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 TRERF1Q96PN7 1200 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 KIF2CQ99661 725 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 SEMA6BQ9H3T3 888 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 STARD7Q9NQZ5 370 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 TMEM39AQ9NV64 488 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 PRR12Q9ULL5 1215 aa11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 FRMPD2Q68DX3 1309 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-208ENST00000486159 KIAA0355O15063 1070 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 RAG1P15918 1043 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 NOVP48745 357 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 MCM2P49736 904 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 STAT2P52630 851 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 RCSD1Q6JBY9 416 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 C16orf59Q7L2K0 433 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 PPP1R13LQ8WUF5 828 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 GMCL1Q96IK5 515 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 CDX2Q99626 313 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 TMEM47Q9BQJ4 181 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 CPVLQ9H3G5 476 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 ACAD9Q9H845 621 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 GPCPD1Q9NPB8 672 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 DIAPH3Q9NSV4 1193 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 ANAPC4Q9UJX5 808 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
TMEM39A-208ENST00000486159 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
TMEM39A-208ENST00000486159 SGSM2O43147 1006 aa11□□□□□ -0.65
TMEM39A-208ENST00000486159 MAP3K13O43283 966 aa11□□□□□ -0.65
TMEM39A-208ENST00000486159 ST18O60284 1047 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms