RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 GVINP1Q7Z2Y8 2422 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 TMEM221A6NGB7 291 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 M0R296 226 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 IGSF3O75054 1194 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 KRT37O76014 449 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-213ENST00000486116 SUPT20HL2P0C7V6 817 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 SMPD1P17405 629 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 KCNJ6P48051 423 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 FAM83BQ5T0W9 1011 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTPN7-213ENST00000486116 ASCL5Q7RTU5 278 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTPN7-213ENST00000486116 PBXIP1Q96AQ6 731 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 PABPC5Q96DU9 382 aaKnown RBP11.74□□□□□ -0.53
PTPN7-213ENST00000486116 MEIS3Q99687 375 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 DBNDD2Q9BQY9 259 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 AP5M1Q9H0R1 490 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 FAM50BQ9Y247 325 aa11.74□□□□□ -0.53
PTPN7-213ENST00000486116 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 RBAK-RBAKDNI3L0D1 243 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 DYNC1LI2O43237 492 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-213ENST00000486116 ZEB2O60315 1214 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 RGS20O76081 388 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 CYP2D6P10635 497 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 MTX1Q13505 466 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 TRIM67Q6ZTA4 783 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 ATOH1Q92858 354 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-213ENST00000486116 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
PTPN7-213ENST00000486116 RIOK1Q9BRS2 568 aaKnown RBP11.73□□□□□ -0.53
PTPN7-213ENST00000486116 C17orf80Q9BSJ5 609 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 ZBED2Q9BTP6 218 aa11.73□□□□□ -0.53
PTPN7-213ENST00000486116 DDX49Q9Y6V7 483 aaKnown RBP11.73□□□□□ -0.53
PTPN7-213ENST00000486116 ZFHX4Q86UP3 3567 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 ZNF292O60281 2723 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 PROB1E7EW31 1015 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
PTPN7-213ENST00000486116 GJB5O95377 273 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 EEF2P13639 858 aaKnown RBP11.72□□□□□ -0.53
PTPN7-213ENST00000486116 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 VCPP55072 806 aaKnown RBP11.72□□□□□ -0.53
PTPN7-213ENST00000486116 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 GPNMBQ14956 572 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
PTPN7-213ENST00000486116 PKN1Q16512 942 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 TCTN1Q2MV58 587 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 SUGP1Q8IWZ8 645 aaKnown RBP11.72□□□□□ -0.53
PTPN7-213ENST00000486116 ANKRD35Q8N283 1001 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 FBXL6Q8N531 539 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 NUP88Q99567 741 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-213ENST00000486116 RAD9AQ99638 391 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
PTPN7-213ENST00000486116 ATP2A1O14983 1001 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 LTBRP36941 435 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 ID4P47928 161 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 TIGD5Q53EQ6 642 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 TCEAL5Q5H9L2 206 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 CCDC158Q5M9N0 1113 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 EP400NLQ6ZTU2 488 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 CPXCR1Q8N123 301 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 ZNF512BQ96KM6 892 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-213ENST00000486116 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.53
PTPN7-213ENST00000486116 CACNA1GO43497 2377 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 PRR23AA6NEV1 266 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 PURAQ00577 322 aaKnown RBP11.7□□□□□ -0.54
PTPN7-213ENST00000486116 TNNI3KQ59H18 835 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 TAPT1Q6NXT6 567 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 FAM133AQ8N9E0 248 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 POP1Q99575 1024 aaKnown RBP11.7□□□□□ -0.54
PTPN7-213ENST00000486116 RAVER2Q9HCJ3 691 aaKnown RBP11.7□□□□□ -0.54
PTPN7-213ENST00000486116 GOPCQ9HD26 462 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 HDAC5Q9UQL6 1122 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 Q9Y3F1 56 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 WDR87Q6ZQQ6 2873 aa11.7□□□□□ -0.54
PTPN7-213ENST00000486116 MED19A0JLT2 244 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-213ENST00000486116 H0Y858 1186 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 MBTPS2O43462 519 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 RAD21O60216 631 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 CLUL1Q15846 466 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 NBPF20Q3BBV1 942 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 FAM47CQ5HY64 1035 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 FAM117BQ6P1L5 589 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 RPAINQ86UA6 219 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 FBXO16Q8IX29 292 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-213ENST00000486116 FSD1Q9BTV5 496 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 ANTXR1Q9H6X2 564 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 TLR9Q9NR96 1032 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms