RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 TLK2Q86UE8 772 aa18.4■□□□□ 0.54
PLXNB3-208ENST00000485980 SLC43A3Q8NBI5 491 aa18.4■□□□□ 0.54
PLXNB3-208ENST00000485980 NOC4LQ9BVI4 516 aaKnown RBP18.4■□□□□ 0.54
PLXNB3-208ENST00000485980 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
PLXNB3-208ENST00000485980 PCDHA11Q9Y5I1 949 aa18.4■□□□□ 0.54
PLXNB3-208ENST00000485980 ZEB2O60315 1214 aa18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 KCNQ1P51787 676 aa18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 FSCN1Q16658 493 aaKnown RBP18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 SCLYQ96I15 445 aa18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 ASTN1O14525 1302 aa18.39■□□□□ 0.53
PLXNB3-208ENST00000485980 RFXAPO00287 272 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 B4GALT4O60513 344 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 ATP2A2P16615 1042 aaKnown RBP18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 PTGS1P23219 599 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 OAZ1P54368 228 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 PSMC6P62333 389 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 NKX3-2P78367 333 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 WNT8AQ9H1J5 351 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 MYH4Q9Y623 1939 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 GRIN2DO15399 1336 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 XIRP2A4UGR9 3374 aa18.38■□□□□ 0.53
PLXNB3-208ENST00000485980 ASB14A6NK59 587 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 GTPBP6O43824 516 aaPredicted RBP18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 PRDM1O75626 825 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 SBK1Q52WX2 424 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 EEPD1Q7L9B9 569 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 LRRC47Q8N1G4 583 aaKnown RBP18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 FAM133AQ8N9E0 248 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 STRBPQ96SI9 672 aaKnown RBP18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 CERS4Q9HA82 394 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 MYH7P12883 1935 aa18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 GREB1LQ9C091 1923 aaPredicted RBP18.37■□□□□ 0.53
PLXNB3-208ENST00000485980 SOWAHBA6NEL2 793 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 BMP3P12645 472 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 SMPD1P17405 629 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 IKQ13123 557 aaPredicted RBP18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 ANKRD45Q5TZF3 282 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 SLFN13Q68D06 897 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 AGBL1Q96MI9 1066 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 SEZ6LQ9BYH1 1024 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 PDGFCQ9NRA1 345 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 RNF146Q9NTX7 359 aa18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
PLXNB3-208ENST00000485980 PRRC2BQ5JSZ5 2229 aaKnown RBP18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 IGKV6D-41A0A0C4DH26 115 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 GSG1L2A8MUP6 293 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 ERC2O15083 957 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 TTLL1O95922 423 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 TTLL4Q14679 1199 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 MKL1Q969V6 931 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 ECHDC1Q9NTX5 307 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 MTMR4Q9NYA4 1195 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 MTCH2Q9Y6C9 303 aa18.35■□□□□ 0.53
PLXNB3-208ENST00000485980 APPP05067 770 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 CA3P07451 260 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 FDX1P10109 184 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 ALAS1P13196 640 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 IQSEC1Q6DN90 963 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 FBXO16Q8IX29 292 aaPredicted RBP18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 TRERF1Q96PN7 1200 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 EPHX3Q9H6B9 360 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 HCN4Q9Y3Q4 1203 aa18.34■□□□□ 0.53
PLXNB3-208ENST00000485980 CYP2C9P11712 490 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 TDO2P48775 406 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 STAT2P52630 851 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 TMEM63BQ5T3F8 832 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 GIMAP6Q6P9H5 292 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 LRFN3Q9BTN0 628 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 TRMT13Q9NUP7 481 aaKnown RBP18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 TRANK1O15050 2925 aa18.33■□□□□ 0.52
PLXNB3-208ENST00000485980 SUPT20HL2P0C7V6 817 aa18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 KRT40Q6A162 431 aa18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 ARNTL2Q8WYA1 636 aa18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 VWCEQ96DN2 955 aa18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 Q9Y3F1 56 aa18.32■□□□□ 0.52
PLXNB3-208ENST00000485980 PFKMP08237 780 aa18.31■□□□□ 0.52
PLXNB3-208ENST00000485980 TSPY3P0CV98 308 aa18.31■□□□□ 0.52
PLXNB3-208ENST00000485980 TSPY8P0CW00 308 aa18.31■□□□□ 0.52
PLXNB3-208ENST00000485980 ACTN1P12814 892 aa18.31■□□□□ 0.52
PLXNB3-208ENST00000485980 SNAP25P60880 206 aa18.31■□□□□ 0.52
PLXNB3-208ENST00000485980 TKFCQ3LXA3 575 aa18.31■□□□□ 0.52
PLXNB3-208ENST00000485980 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms