RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 FAAP100Q0VG06 881 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 MUM1L1Q5H9M0 696 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 GNASQ5JWF2 1037 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 BTNL9Q6UXG8 535 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 MFSD6Q6ZSS7 791 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 PLEKHM2Q8IWE5 1019 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 VTI1AQ96AJ9 217 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
SMC4-216ENST00000485645 OSBPL3Q9H4L5 887 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 LAMA2P24043 3122 aaKnown RBP20.2■□□□□ 0.82
SMC4-216ENST00000485645 IGHDP01880 384 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 SLC16A2P36021 539 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 TNFAIP2Q03169 654 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 AKNAD1Q5T1N1 836 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 SYDE2Q5VT97 1194 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 NOL8Q76FK4 1167 aaKnown RBP20.2■□□□□ 0.82
SMC4-216ENST00000485645 GPCPD1Q9NPB8 672 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 MROH7Q68CQ1 1323 aa20.2■□□□□ 0.82
SMC4-216ENST00000485645 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.19■□□□□ 0.82
SMC4-216ENST00000485645 NUCB1Q02818 461 aa20.19■□□□□ 0.82
SMC4-216ENST00000485645 TTC14Q96N46 770 aa20.19■□□□□ 0.82
SMC4-216ENST00000485645 RNF41Q9H4P4 317 aaPredicted RBP20.19■□□□□ 0.82
SMC4-216ENST00000485645 FRMPD2Q68DX3 1309 aaPredicted RBP20.19■□□□□ 0.82
SMC4-216ENST00000485645 A0A0U1RQG5 324 aaPredicted RBP20.18■□□□□ 0.82
SMC4-216ENST00000485645 CDK7P50613 346 aa20.18■□□□□ 0.82
SMC4-216ENST00000485645 NKX3-2P78367 333 aa20.18■□□□□ 0.82
SMC4-216ENST00000485645 FPGSQ05932 587 aa20.18■□□□□ 0.82
SMC4-216ENST00000485645 ZNF697Q5TEC3 545 aa20.18■□□□□ 0.82
SMC4-216ENST00000485645 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
SMC4-216ENST00000485645 ZNF213O14771 459 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 CTAGE5O15320 804 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 PDHBP11177 359 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 ESR2Q92731 530 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 FAM161BQ96MY7 647 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 DIAPH3Q9NSV4 1193 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 GNEQ9Y223 722 aaKnown RBP20.17■□□□□ 0.82
SMC4-216ENST00000485645 ASTN1O14525 1302 aa20.17■□□□□ 0.82
SMC4-216ENST00000485645 ARVCFO00192 962 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 TIMP1P01033 207 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 SMAD3P84022 425 aaKnown RBP20.16■□□□□ 0.82
SMC4-216ENST00000485645 BEX3Q00994 111 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 IQSEC1Q6DN90 963 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
SMC4-216ENST00000485645 EEPD1Q7L9B9 569 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 TLK2Q86UE8 772 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 FBXO16Q8IX29 292 aaPredicted RBP20.16■□□□□ 0.82
SMC4-216ENST00000485645 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
SMC4-216ENST00000485645 AP5M1Q9H0R1 490 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 ADD3Q9UEY8 706 aaKnown RBP20.16■□□□□ 0.82
SMC4-216ENST00000485645 TBX21Q9UL17 535 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 PNMA2Q9UL42 364 aa20.16■□□□□ 0.82
SMC4-216ENST00000485645 HIP1O00291 1037 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 SMPD1P17405 629 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 EPHB4P54760 987 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 ZNF543Q08ER8 600 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 BAATQ14032 418 aaPredicted RBP20.15■□□□□ 0.82
SMC4-216ENST00000485645 TAPT1Q6NXT6 567 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 POTEDQ86YR6 584 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 GUCD1Q96NT3 240 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 PURBQ96QR8 312 aaKnown RBP20.15■□□□□ 0.82
SMC4-216ENST00000485645 VTA1Q9NP79 307 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 PDGFCQ9NRA1 345 aa20.15■□□□□ 0.82
SMC4-216ENST00000485645 DDX49Q9Y6V7 483 aaKnown RBP20.15■□□□□ 0.82
SMC4-216ENST00000485645 NEDD4P46934 1319 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 NFIBO00712 420 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 TLR3O15455 904 aaKnown RBP20.14■□□□□ 0.81
SMC4-216ENST00000485645 DYNC1LI2O43237 492 aaPredicted RBP20.14■□□□□ 0.81
SMC4-216ENST00000485645 ZEB2O60315 1214 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 SNHG28P0DPA3 235 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 NT5C2P49902 561 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 ZKSCAN3Q9BRR0 538 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 Q9Y3F1 56 aa20.14■□□□□ 0.81
SMC4-216ENST00000485645 LOC102724159A0A0B4J2E5 919 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 CABYRO75952 493 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 PWP2Q15269 919 aaKnown RBP20.13■□□□□ 0.81
SMC4-216ENST00000485645 FSCN1Q16658 493 aaKnown RBP20.13■□□□□ 0.81
SMC4-216ENST00000485645 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 GPATCH4Q5T3I0 446 aaKnown RBP20.13■□□□□ 0.81
SMC4-216ENST00000485645 MFSD5Q6N075 450 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 CXCL17Q6UXB2 119 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 IQCA1Q86XH1 822 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 FAM126BQ8IXS8 530 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 LRRC37A2A6NM11 1700 aa20.13■□□□□ 0.81
SMC4-216ENST00000485645 LCTP09848 1927 aa20.12■□□□□ 0.81
SMC4-216ENST00000485645 ALDH5A1P51649 535 aaPredicted RBP20.12■□□□□ 0.81
SMC4-216ENST00000485645 SEMA6BQ9H3T3 888 aa20.12■□□□□ 0.81
SMC4-216ENST00000485645 WDR19Q8NEZ3 1342 aa20.11■□□□□ 0.81
SMC4-216ENST00000485645 KDM4AO75164 1064 aa20.11■□□□□ 0.81
SMC4-216ENST00000485645 PTGS1P23219 599 aa20.11■□□□□ 0.81
SMC4-216ENST00000485645 CALML3P27482 149 aa20.11■□□□□ 0.81
SMC4-216ENST00000485645 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMC4-216ENST00000485645 RNF207Q6ZRF8 634 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms