RNA–Protein interactions for RNA: ENST00000485583.1

LRCH4-206, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-206ENST00000485583 RRP12Q5JTH9 1297 aaKnown RBP21.32■■□□□ 1
LRCH4-206ENST00000485583 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 BTNL9Q6UXG8 535 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 RNPC3Q96LT9 517 aaKnown RBP21.32■■□□□ 1
LRCH4-206ENST00000485583 TMEM47Q9BQJ4 181 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 LNPKQ9C0E8 428 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 RANBP17Q9H2T7 1088 aaKnown RBP21.32■■□□□ 1
LRCH4-206ENST00000485583 CYP39A1Q9NYL5 469 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 TBX21Q9UL17 535 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 CCPG1Q9ULG6 757 aa21.32■■□□□ 1
LRCH4-206ENST00000485583 GNEQ9Y223 722 aaKnown RBP21.32■■□□□ 1
LRCH4-206ENST00000485583 LAMA2P24043 3122 aaKnown RBP21.32■■□□□ 1
LRCH4-206ENST00000485583 A0A0U1RQG5 324 aaPredicted RBP21.31■■□□□ 1
LRCH4-206ENST00000485583 ARVCFO00192 962 aa21.31■■□□□ 1
LRCH4-206ENST00000485583 TIMP1P01033 207 aa21.31■■□□□ 1
LRCH4-206ENST00000485583 TOP1P11387 765 aaKnown RBP21.31■■□□□ 1
LRCH4-206ENST00000485583 VTI1AQ96AJ9 217 aa21.31■■□□□ 1
LRCH4-206ENST00000485583 SEMA6BQ9H3T3 888 aa21.31■■□□□ 1
LRCH4-206ENST00000485583 DDX49Q9Y6V7 483 aaKnown RBP21.31■■□□□ 1
LRCH4-206ENST00000485583 TRIM6-TRIM34B2RNG4 842 aa21.3■■□□□ 1
LRCH4-206ENST00000485583 SLC16A2P36021 539 aa21.3■■□□□ 1
LRCH4-206ENST00000485583 BEX3Q00994 111 aa21.3■■□□□ 1
LRCH4-206ENST00000485583 AAMPQ13685 434 aa21.3■■□□□ 1
LRCH4-206ENST00000485583 NSMFQ6X4W1 530 aa21.3■■□□□ 1
LRCH4-206ENST00000485583 SMC5Q8IY18 1101 aa21.3■■□□□ 1
LRCH4-206ENST00000485583 CCDC171Q6TFL3 1326 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 SMPD1P17405 629 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 HAND2P61296 217 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 SYDE2Q5VT97 1194 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 NOL8Q76FK4 1167 aaKnown RBP21.29■■□□□ 1
LRCH4-206ENST00000485583 TLK2Q86UE8 772 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 FAM126BQ8IXS8 530 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 RILPL2Q969X0 211 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 CDX2Q99626 313 aaPredicted RBP21.29■■□□□ 1
LRCH4-206ENST00000485583 TTYH1Q9H313 450 aaPredicted RBP21.29■■□□□ 1
LRCH4-206ENST00000485583 PDGFCQ9NRA1 345 aa21.29■■□□□ 1
LRCH4-206ENST00000485583 AKNAD1Q5T1N1 836 aa21.28■■□□□ 1
LRCH4-206ENST00000485583 MFSD5Q6N075 450 aa21.28■■□□□ 1
LRCH4-206ENST00000485583 TAPT1Q6NXT6 567 aa21.28■■□□□ 1
LRCH4-206ENST00000485583 MORC4Q8TE76 937 aa21.28■■□□□ 1
LRCH4-206ENST00000485583 PURBQ96QR8 312 aaKnown RBP21.28■■□□□ 1
LRCH4-206ENST00000485583 GPCPD1Q9NPB8 672 aa21.28■■□□□ 1
LRCH4-206ENST00000485583 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
LRCH4-206ENST00000485583 PDHBP11177 359 aa21.27■■□□□ 1
LRCH4-206ENST00000485583 PCP11498 1178 aaKnown RBP21.27■■□□□ 1
LRCH4-206ENST00000485583 IQSEC1Q6DN90 963 aa21.27■■□□□ 1
LRCH4-206ENST00000485583 B4GALNT3Q6L9W6 998 aa21.27■■□□□ 1
LRCH4-206ENST00000485583 MFSD6Q6ZSS7 791 aa21.27■■□□□ 1
LRCH4-206ENST00000485583 EEPD1Q7L9B9 569 aa21.27■■□□□ 1
LRCH4-206ENST00000485583 FBXO16Q8IX29 292 aaPredicted RBP21.27■■□□□ 1
LRCH4-206ENST00000485583 TTC14Q96N46 770 aa21.27■■□□□ 1
LRCH4-206ENST00000485583 RWDD1Q9H446 243 aaPredicted RBP21.27■■□□□ 1
LRCH4-206ENST00000485583 NFIBO00712 420 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 TLR3O15455 904 aaKnown RBP21.26■□□□□ 0.99
LRCH4-206ENST00000485583 DYNC1LI2O43237 492 aaPredicted RBP21.26■□□□□ 0.99
LRCH4-206ENST00000485583 CABYRO75952 493 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 CD4P01730 458 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 SDSP20132 328 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 PTGS1P23219 599 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 BAATQ14032 418 aaPredicted RBP21.26■□□□□ 0.99
LRCH4-206ENST00000485583 FSCN1Q16658 493 aaKnown RBP21.26■□□□□ 0.99
LRCH4-206ENST00000485583 CXCL17Q6UXB2 119 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 TBC1D10CQ8IV04 446 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 PLEKHM2Q8IWE5 1019 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 SLC43A3Q8NBI5 491 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.26■□□□□ 0.994e-7■■□□□ 11.4
LRCH4-206ENST00000485583 AP5M1Q9H0R1 490 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 OSBPL3Q9H4L5 887 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 VTA1Q9NP79 307 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 Q9Y3F1 56 aa21.26■□□□□ 0.99
LRCH4-206ENST00000485583 TMEM265A0A087WTH1 108 aa21.25■□□□□ 0.99
LRCH4-206ENST00000485583 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.25■□□□□ 0.99
LRCH4-206ENST00000485583 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.25■□□□□ 0.99
LRCH4-206ENST00000485583 SNHG28P0DPA3 235 aa21.25■□□□□ 0.99
LRCH4-206ENST00000485583 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
LRCH4-206ENST00000485583 ZNF543Q08ER8 600 aa21.25■□□□□ 0.99
LRCH4-206ENST00000485583 PPIGQ13427 754 aaKnown RBP eCLIP21.25■□□□□ 0.993e-10■■■■■ 39.7
LRCH4-206ENST00000485583 TMEM63BQ5T3F8 832 aa21.25■□□□□ 0.99
LRCH4-206ENST00000485583 C16orf59Q7L2K0 433 aa21.25■□□□□ 0.99
LRCH4-206ENST00000485583 CHD1LQ86WJ1 897 aa21.25■□□□□ 0.99
LRCH4-206ENST00000485583 ADD3Q9UEY8 706 aaKnown RBP21.25■□□□□ 0.99
LRCH4-206ENST00000485583 IGHDP01880 384 aa21.24■□□□□ 0.99
LRCH4-206ENST00000485583 ALDH5A1P51649 535 aaPredicted RBP21.24■□□□□ 0.99
LRCH4-206ENST00000485583 KIAA1211Q6ZU35 1233 aa21.24■□□□□ 0.99
LRCH4-206ENST00000485583 TMEM199Q8N511 208 aa21.24■□□□□ 0.99
LRCH4-206ENST00000485583 PPP1R12CQ9BZL4 782 aa21.24■□□□□ 0.99
LRCH4-206ENST00000485583 RNF41Q9H4P4 317 aaPredicted RBP21.24■□□□□ 0.99
LRCH4-206ENST00000485583 LAMA4Q16363 1823 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 LOC102724159A0A0B4J2E5 919 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 PTPDC1A2A3K4 754 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 ZEB2O60315 1214 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 CSF2RAP15509 400 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 NUCB1Q02818 461 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 ITGA7Q13683 1181 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 PWP2Q15269 919 aaKnown RBP21.23■□□□□ 0.99
LRCH4-206ENST00000485583 TMEM240Q5SV17 173 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.23■□□□□ 0.99
LRCH4-206ENST00000485583 CLEC4DQ8WXI8 215 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 MYLIPQ8WY64 445 aa21.23■□□□□ 0.99
LRCH4-206ENST00000485583 PNMA2Q9UL42 364 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms