RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 FBXL6Q8N531 539 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 USHBP1Q8N6Y0 703 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 FRS2Q8WU20 508 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 SCLYQ96I15 445 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 SLC12A9Q9BXP2 914 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 ATG3Q9NT62 314 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 SNX11Q9Y5W9 270 aa5.7□□□□□ -1.5
FN1-222ENST00000485567 TTBK1Q5TCY1 1321 aaPredicted RBP5.7□□□□□ -1.5
FN1-222ENST00000485567 TCRBV16S1A1N1A0A5B0 115 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 FAM83GA6ND36 823 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 B4E1Z4 1266 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 IGLV1-40P01703 118 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 APPP05067 770 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 THBDP07204 575 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 IGFALSP35858 605 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 FLT3P36888 993 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 NFKB2Q00653 900 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 KCNMA1Q12791 1236 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 PRSS53Q2L4Q9 553 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 CT47A1Q5JQC4 288 aaPredicted RBP5.69□□□□□ -1.5
FN1-222ENST00000485567 EEF1DP3Q658K8 133 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 RNF111Q6ZNA4 994 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 ARHGAP27Q6ZUM4 889 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 FGD2Q7Z6J4 655 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 ANKLE2Q86XL3 938 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 OSBPL1AQ9BXW6 950 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 GPR27Q9NS67 375 aa5.69□□□□□ -1.5
FN1-222ENST00000485567 TNPO3Q9Y5L0 923 aaKnown RBP5.69□□□□□ -1.5
FN1-222ENST00000485567 ASXL2Q76L83 1435 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 TRBV23OR9-2A0A075B6M9 112 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 STXBP3O00186 592 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 MEFVO15553 781 aaPredicted RBP5.68□□□□□ -1.5
FN1-222ENST00000485567 OPA1O60313 960 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 CEACAM5P06731 702 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 IFNGR1P15260 489 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 CPEP16870 476 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 PMLP29590 882 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 LTBRP36941 435 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 SEPHS1P49903 392 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 PCBP3P57721 371 aaKnown RBP5.68□□□□□ -1.5
FN1-222ENST00000485567 GPR85P60893 370 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 KCNAB2Q13303 367 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 RTP2Q5QGT7 225 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 DDX42Q86XP3 938 aaKnown RBP eCLIP5.68□□□□□ -1.5
FN1-222ENST00000485567 JAMLQ86YT9 394 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 SPACA3Q8IXA5 215 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 PPIL6Q8IXY8 311 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 AFAP1L2Q8N4X5 818 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 PRPF38AQ8NAV1 312 aaKnown RBP5.68□□□□□ -1.5
FN1-222ENST00000485567 HSPA12BQ96MM6 686 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 MMP19Q99542 508 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 ORAI3Q9BRQ5 295 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 MTFR1LQ9H019 292 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 GPRC5CQ9NQ84 441 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 TPSG1Q9NRR2 321 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 SEMA3GQ9NS98 782 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 STK17AQ9UEE5 414 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 MCM8Q9UJA3 840 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 PLAGL2Q9UPG8 496 aa5.68□□□□□ -1.5
FN1-222ENST00000485567 TMEM265A0A087WTH1 108 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 SSU72P8A0A1W2PR75 194 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 WDR64B1ANS9 1081 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 ALG1L2C9J202 215 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 ARNTLO00327 626 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 CRTAMO95727 393 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 SYPP08247 313 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 PDGFRBP09619 1106 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
FN1-222ENST00000485567 DHCR24Q15392 516 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 PLEKHG6Q3KR16 790 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 CDKAL1Q5VV42 579 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 KCNT2Q6UVM3 1135 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
FN1-222ENST00000485567 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 KSR1Q8IVT5 923 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 UBR7Q8N806 425 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.67□□□□□ -1.5
FN1-222ENST00000485567 SHKBP1Q8TBC3 707 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 UBE2FQ969M7 185 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 IRF2BPLQ9H1B7 796 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 HOMER2Q9NSB8 354 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 ZSWIM5Q9P217 1185 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 TCFL5Q9UL49 500 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 TRAF6Q9Y4K3 522 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 U3KQE9 123 aa5.67□□□□□ -1.5
FN1-222ENST00000485567 EYA4O95677 639 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 GSTM1P09488 218 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 PLS3P13797 630 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 KCNA6P17658 529 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 PAMP19021 973 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 FSTP19883 344 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 CDKN1CP49918 316 aaPredicted RBP5.66□□□□□ -1.5
FN1-222ENST00000485567 RBM10P98175 930 aaKnown RBP5.66□□□□□ -1.5
FN1-222ENST00000485567 GUCY1A3Q02108 690 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 RASSF7Q02833 373 aa5.66□□□□□ -1.5
FN1-222ENST00000485567 PCBP1Q15365 356 aaKnown RBP eCLIP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms