RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
HMGN1-215ENST00000485550 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-215ENST00000485550 MUC6Q6W4X9 2439 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 MYH7P12883 1935 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 TSPY3P0CV98 308 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 TSPY8P0CW00 308 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 BMP1P13497 986 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 KCNQ1P51787 676 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 TFAP4Q01664 338 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 PPARAQ07869 468 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 RAB30Q15771 203 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 SNRNP48Q6IEG0 339 aaKnown RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 CCSAPQ6IQ19 270 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 GLT1D1Q96MS3 346 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 SLC28A3Q9HAS3 691 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 RAVER2Q9HCJ3 691 aaKnown RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
HMGN1-215ENST00000485550 RIPK3Q9Y572 518 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 MROH7Q68CQ1 1323 aa12.57□□□□□ -0.4
HMGN1-215ENST00000485550 ZBED4O75132 1171 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 TTLL1O95922 423 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 C6orf222P0C671 652 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-215ENST00000485550 CYP2C18P33260 490 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 CDK7P50613 346 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 PDE4BQ07343 736 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 SLFN13Q68D06 897 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 MKL1Q969V6 931 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 LRFN3Q9BTN0 628 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 TEX13BQ9BXU2 312 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 FAM184BQ9ULE4 1060 aa12.56□□□□□ -0.4
HMGN1-215ENST00000485550 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-215ENST00000485550 ASGR1P07306 291 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
HMGN1-215ENST00000485550 RABGGTBP53611 331 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 SKIV2LQ15477 1246 aaKnown RBP12.55□□□□□ -0.4
HMGN1-215ENST00000485550 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 FAM126BQ8IXS8 530 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 HERVK_113Q902F9 699 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 IL23AQ9NPF7 189 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 MTMR7Q9Y216 660 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 TRIP12Q14669 1992 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-215ENST00000485550 ELP1O95163 1332 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
HMGN1-215ENST00000485550 XIRP2A4UGR9 3374 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 TRANK1O15050 2925 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-215ENST00000485550 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 ARVCFO00192 962 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 FOXP2O15409 715 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
HMGN1-215ENST00000485550 ADCY6O43306 1168 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 DUSP11O75319 330 aaKnown RBP12.54□□□□□ -0.4
HMGN1-215ENST00000485550 FGBP02675 491 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 BMP3P12645 472 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 MYOGP15173 224 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 MCCP23508 829 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 COPB2P35606 906 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 PDE1AP54750 535 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-215ENST00000485550 B4GALNT3Q6L9W6 998 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 EVI5LQ96CN4 794 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 HOMER2Q9NSB8 354 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 HCN4Q9Y3Q4 1203 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
HMGN1-215ENST00000485550 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 GREB1LQ9C091 1923 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-215ENST00000485550 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 RFXAPO00287 272 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 NMT2O60551 498 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 CST5P28325 142 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-215ENST00000485550 SNAP25P60880 206 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 PCSK9Q8NBP7 692 aaKnown RBP12.53□□□□□ -0.4
HMGN1-215ENST00000485550 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
HMGN1-215ENST00000485550 SLC38A10Q9HBR0 1119 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
HMGN1-215ENST00000485550 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
HMGN1-215ENST00000485550 ATP2A1O14983 1001 aa12.52□□□□□ -0.41
HMGN1-215ENST00000485550 RANBP6O60518 1105 aaKnown RBP12.52□□□□□ -0.41
HMGN1-215ENST00000485550 CD4P01730 458 aa12.52□□□□□ -0.41
HMGN1-215ENST00000485550 SLC1A4P43007 532 aa12.52□□□□□ -0.41
HMGN1-215ENST00000485550 CCL23P55773 120 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms