RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 STAT2P52630 851 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 KIAA1755Q5JYT7 1200 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 ISM2Q6H9L7 571 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 GRAMD1CQ8IYS0 662 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 AOPEPQ8N6M6 819 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 BPIFA3Q9BQP9 254 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 VCPKMTQ9H867 229 aa18.96■□□□□ 0.63
CTSA-207ENST00000484855 DOCK1Q14185 1865 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 PHF20L1A8MW92 1017 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 SNAP25P60880 206 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 FAM83BQ5T0W9 1011 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 FBXO11Q86XK2 927 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 UTRNP46939 3433 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
CTSA-207ENST00000484855 HS1BP3Q53T59 392 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 SMARCE1Q969G3 411 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 DEFB129Q9H1M3 183 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 PRR12Q9ULL5 1215 aa18.95■□□□□ 0.62
CTSA-207ENST00000484855 PTMAP06454 111 aaKnown RBP18.94■□□□□ 0.62
CTSA-207ENST00000484855 IQUBQ8NA54 791 aa18.94■□□□□ 0.62
CTSA-207ENST00000484855 CCDC39Q9UFE4 941 aa18.94■□□□□ 0.62
CTSA-207ENST00000484855 USH1GQ495M9 461 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 NT5DC1Q5TFE4 455 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 GPC2Q8N158 579 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 AFMP43652 599 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 E2F4Q16254 413 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 CCDC84Q86UT8 332 aaPredicted RBP18.93■□□□□ 0.62
CTSA-207ENST00000484855 PAGE5Q96GU1 130 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 FEZ1Q99689 392 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 GLIS2Q9BZE0 524 aaPredicted RBP18.93■□□□□ 0.62
CTSA-207ENST00000484855 GPRC5DQ9NZD1 345 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 MAN1B1Q9UKM7 699 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 SMCHD1A6NHR9 2005 aa18.93■□□□□ 0.62
CTSA-207ENST00000484855 CDC25AP30304 524 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 SH3RF1Q7Z6J0 888 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 APOBEC3FQ8IUX4 373 aaKnown RBP18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 SMC2O95347 1197 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 TDP2O95551 362 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 SARSP49591 514 aaKnown RBP18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 CALCRLQ16602 461 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 ANGEL2Q5VTE6 544 aaKnown RBP18.92■□□□□ 0.62
CTSA-207ENST00000484855 USP17L6PQ6QN14 398 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 TRPM4Q8TD43 1214 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 CHURC1Q8WUH1 139 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 AK8Q96MA6 479 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 ZNF341Q9BYN7 854 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 TRIM5Q9C035 493 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 GINM1Q9NU53 330 aa18.92■□□□□ 0.62
CTSA-207ENST00000484855 PP2D1A8MPX8 630 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 UBA7P41226 1012 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
CTSA-207ENST00000484855 NBPF12Q5TAG4 269 aaPredicted RBP18.91■□□□□ 0.62
CTSA-207ENST00000484855 TRIML1Q8N9V2 468 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 RASSF8Q8NHQ8 419 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 DISC1Q9NRI5 854 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 SLC37A4O43826 429 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 EDIL3O43854 480 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
CTSA-207ENST00000484855 AP3B2Q13367 1082 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 DCAF15Q66K64 600 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 PDXDC2PQ6P474 469 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 SPATA20Q8TB22 786 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 ANO3Q9BYT9 981 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 CCSER1Q9C0I3 900 aa18.91■□□□□ 0.62
CTSA-207ENST00000484855 SMTNL1A8MU46 457 aa18.9■□□□□ 0.62
CTSA-207ENST00000484855 STAT6P42226 847 aa18.9■□□□□ 0.62
CTSA-207ENST00000484855 PPP4R3AQ6IN85 833 aa18.9■□□□□ 0.62
CTSA-207ENST00000484855 SARM1Q6SZW1 724 aa18.9■□□□□ 0.62
CTSA-207ENST00000484855 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
CTSA-207ENST00000484855 KIFC2Q96AC6 838 aa18.9■□□□□ 0.62
CTSA-207ENST00000484855 POLR2AP24928 1970 aaKnown RBP18.9■□□□□ 0.62
CTSA-207ENST00000484855 ESPNB1AK53 854 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 MEIS2O14770 477 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 PLA2G6O60733 806 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.62
CTSA-207ENST00000484855 ZNF75DP51815 510 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 TPM4P67936 248 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 TRAF1Q13077 416 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 MORC3Q14149 939 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 PLA2G4DQ86XP0 818 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 FAM43AQ8N2R8 423 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 MTMR9Q96QG7 549 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 NAP1L4Q99733 375 aaKnown RBP18.89■□□□□ 0.62
CTSA-207ENST00000484855 FEM1BQ9UK73 627 aa18.89■□□□□ 0.62
CTSA-207ENST00000484855 GCFC2P16383 781 aaKnown RBP18.89■□□□□ 0.61
CTSA-207ENST00000484855 BMP6P22004 513 aa18.89■□□□□ 0.61
CTSA-207ENST00000484855 TECP42680 631 aa18.89■□□□□ 0.61
CTSA-207ENST00000484855 DPYDQ12882 1025 aa18.89■□□□□ 0.61
CTSA-207ENST00000484855 MCTP2Q6DN12 878 aa18.89■□□□□ 0.61
CTSA-207ENST00000484855 HOOK2Q96ED9 719 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms