RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 L1CAMP32004 1257 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 YBX1P67809 324 aaKnown RBP6.85□□□□□ -1.31
SMC4-215ENST00000484799 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
SMC4-215ENST00000484799 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 DPY19L1Q2PZI1 675 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 ZC3H14Q6PJT7 736 aaKnown RBP6.85□□□□□ -1.31
SMC4-215ENST00000484799 METTL16Q86W50 562 aaKnown RBP6.85□□□□□ -1.31
SMC4-215ENST00000484799 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 C19orf47Q8N9M1 422 aaKnown RBP6.85□□□□□ -1.31
SMC4-215ENST00000484799 RASGRP4Q8TDF6 673 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 USP33Q8TEY7 942 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 MZB1Q8WU39 189 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 ANAPC16Q96DE5 110 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 FGD4Q96M96 766 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 APBA2Q99767 749 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 TGIF2Q9GZN2 237 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 PDLIM7Q9NR12 457 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 KLHL14Q9P2G3 628 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 A0A1W2PQH9 124 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 NOP56O00567 594 aaKnown RBP6.84□□□□□ -1.31
SMC4-215ENST00000484799 FGF10O15520 208 aaPredicted RBP6.84□□□□□ -1.31
SMC4-215ENST00000484799 PI3P19957 117 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 RBM10P98175 930 aaKnown RBP6.84□□□□□ -1.31
SMC4-215ENST00000484799 AMPD2Q01433 879 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 EEF1DP3Q658K8 133 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 KIAA1211LQ6NV74 962 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 PAQR3Q6TCH7 311 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
SMC4-215ENST00000484799 TMEM52Q8NDY8 209 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 CNTD2Q9H8S5 307 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 GCM1Q9NP62 436 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 STRIP2Q9ULQ0 834 aa6.84□□□□□ -1.31
SMC4-215ENST00000484799 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 F8W031 263 aaPredicted RBP6.83□□□□□ -1.32
SMC4-215ENST00000484799 VAMP4O75379 141 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 SASH1O94885 1247 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMC4-215ENST00000484799 TARBP2Q15633 366 aaKnown RBP6.83□□□□□ -1.32
SMC4-215ENST00000484799 CNKSR3Q6P9H4 555 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 VHLLQ6RSH7 139 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 LDHDQ86WU2 507 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 AKT3Q9Y243 479 aa6.83□□□□□ -1.32
SMC4-215ENST00000484799 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
SMC4-215ENST00000484799 TRBV23OR9-2A0A075B6M9 112 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 ANKRD34BA5PLL1 514 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 CYBBP04839 570 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 EPHX1P07099 455 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 INHBBP09529 407 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 IFNGR1P15260 489 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 MAPKAPK2P49137 400 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 AFF3P51826 1226 aaKnown RBP6.82□□□□□ -1.32
SMC4-215ENST00000484799 MVKQ03426 396 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 LILRA6Q6PI73 481 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 ACBD3Q9H3P7 528 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
SMC4-215ENST00000484799 BUB1BO60566 1050 aaPredicted RBP6.81□□□□□ -1.32
SMC4-215ENST00000484799 EFEMP2O95967 443 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 PAMP19021 973 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 TACR1P25103 407 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 GJA8P48165 433 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 EPHB3P54753 998 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 CTSWP56202 376 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 SSPNQ14714 243 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 CBX2Q14781 532 aaPredicted RBP6.81□□□□□ -1.32
SMC4-215ENST00000484799 RPTNQ6XPR3 784 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 NUDT5Q9UKK9 219 aa6.81□□□□□ -1.32
SMC4-215ENST00000484799 NPHP3-ACAD11A0A0J9YXS1 232 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 STXBP3O00186 592 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 ERCC5P28715 1186 aaPredicted RBP6.8□□□□□ -1.32
SMC4-215ENST00000484799 CDR1P51861 262 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 NCKAP1LP55160 1127 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 CASP7P55210 303 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 CORO7P57737 925 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 RCSD1Q6JBY9 416 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 LZTR1Q8N653 840 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 PANK1Q8TE04 598 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 RCC1LQ96I51 464 aaKnown RBP6.8□□□□□ -1.32
SMC4-215ENST00000484799 PWWP2AQ96N64 755 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 PARD6AQ9NPB6 346 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 LRP2BPQ9P2M1 347 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 R3HCC1Q9Y3T6 440 aaKnown RBP6.8□□□□□ -1.32
SMC4-215ENST00000484799 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
SMC4-215ENST00000484799 AURKAO14965 403 aa6.79□□□□□ -1.32
SMC4-215ENST00000484799 ZNF200P98182 395 aaPredicted RBP6.79□□□□□ -1.32
SMC4-215ENST00000484799 NCAPHQ15003 741 aa6.79□□□□□ -1.32
SMC4-215ENST00000484799 NLGN2Q8NFZ4 835 aa6.79□□□□□ -1.32
SMC4-215ENST00000484799 SHDQ96IW2 340 aa6.79□□□□□ -1.32
SMC4-215ENST00000484799 CGGBP1Q9UFW8 167 aaPredicted RBP6.79□□□□□ -1.32
SMC4-215ENST00000484799 ZC3H12DA2A288 527 aaKnown RBP6.78□□□□□ -1.32
SMC4-215ENST00000484799 NPHS1O60500 1241 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 KCNH1O95259 989 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 MSL3P1P0C860 447 aa6.78□□□□□ -1.32
SMC4-215ENST00000484799 PRR5P85299 388 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms