RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 CT47B1P0C2W7 299 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-221ENST00000484566 IGFBP4P22692 258 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 SHMT1P34896 483 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 ZAP70P43403 619 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 SLFN5Q08AF3 891 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 ADGRE1Q14246 886 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 SEPT2Q15019 361 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 TNNI3KQ59H18 835 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 PSRC1Q6PGN9 363 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-221ENST00000484566 ANKRD33Q7Z3H0 272 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 MMP19Q99542 508 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 SPSB2Q99619 263 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 DBNDD2Q9BQY9 259 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.766e-10■■■□□ 16.8
DDX39B-221ENST00000484566 GPR108Q9NPR9 543 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 MSRAQ9UJ68 235 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 CNPY2Q9Y2B0 182 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 FPGT-TNNI3KV9GXZ4 949 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 ATRXP46100 2492 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 LRRC37A2A6NM11 1700 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 MOXD2PA6NHM9 499 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 ADH1BP00325 375 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 GNAI2P04899 355 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 POLR3DP05423 398 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-221ENST00000484566 FAAP100Q0VG06 881 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 KCTD2Q14681 263 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 RAB30Q15771 203 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 TMEM199Q8N511 208 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 ATG4CQ96DT6 458 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 ZNF512BQ96KM6 892 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-221ENST00000484566 TINF2Q9BSI4 451 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 TSEN34Q9BSV6 310 aaKnown RBP10.32□□□□□ -0.76
DDX39B-221ENST00000484566 MTIF3Q9H2K0 278 aaKnown RBP10.32□□□□□ -0.76
DDX39B-221ENST00000484566 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 SH2D4AQ9H788 454 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 PIH1D3Q9NQM4 214 aaKnown RBP10.32□□□□□ -0.76
DDX39B-221ENST00000484566 PARP14Q460N5 1801 aa10.32□□□□□ -0.76
DDX39B-221ENST00000484566 ZFHX2Q9C0A1 2572 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-221ENST00000484566 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-221ENST00000484566 PNMA6EA0A0J9YXQ4 647 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 TLL1O43897 1013 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 ADAMTS4O75173 837 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 GUCY1A2P33402 732 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 COPB2P35606 906 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 ACLYP53396 1101 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 TMED8Q6PL24 325 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-221ENST00000484566 TMEM179Q6ZVK1 233 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 LENG1Q96BZ8 264 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-221ENST00000484566 GLT1D1Q96MS3 346 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 UIMC1Q96RL1 719 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.31□□□□□ -0.76
DDX39B-221ENST00000484566 TBX21Q9UL17 535 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 DIS3Q9Y2L1 958 aaKnown RBP10.31□□□□□ -0.76
DDX39B-221ENST00000484566 SYNRGQ9UMZ2 1314 aa10.31□□□□□ -0.76
DDX39B-221ENST00000484566 GBF1Q92538 1859 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 TRANK1O15050 2925 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 GRXCR1A8MXD5 290 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 TLR3O15455 904 aaKnown RBP10.3□□□□□ -0.76
DDX39B-221ENST00000484566 PGK2P07205 417 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 PLCD1P51178 756 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 TMEM240Q5SV17 173 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 SLC6A16Q9GZN6 736 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 SLC28A3Q9HAS3 691 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 SPC25Q9HBM1 224 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 ZHX1Q9UKY1 873 aaPredicted RBP10.3□□□□□ -0.76
DDX39B-221ENST00000484566 ELP1O95163 1332 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 TRIOO75962 3097 aa10.3□□□□□ -0.76
DDX39B-221ENST00000484566 TPRP12270 2363 aaKnown RBP10.29□□□□□ -0.76
DDX39B-221ENST00000484566 ERC2O15083 957 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 WDR46O15213 610 aaKnown RBP10.29□□□□□ -0.76
DDX39B-221ENST00000484566 ZNF865P0CJ78 1059 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-221ENST00000484566 FDX1P10109 184 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 CSF2RAP15509 400 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 TAL1P17542 331 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-221ENST00000484566 ICA1Q05084 483 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 GABPAQ06546 454 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 TMEM132BQ14DG7 1078 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 MICALL1Q8N3F8 863 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 PCSK9Q8NBP7 692 aaKnown RBP10.29□□□□□ -0.76
DDX39B-221ENST00000484566 ARHGAP45Q92619 1136 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 CRNKL1Q9BZJ0 848 aaKnown RBP10.29□□□□□ -0.76
DDX39B-221ENST00000484566 PPP1R12CQ9BZL4 782 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 NKX2-4Q9H2Z4 354 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 VCPKMTQ9H867 229 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 MCM9Q9NXL9 1143 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 FAM184BQ9ULE4 1060 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 CHD6Q8TD26 2715 aa10.29□□□□□ -0.76
DDX39B-221ENST00000484566 A0A0U1RQG5 324 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-221ENST00000484566 C6orf222P0C671 652 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-221ENST00000484566 ACRP10323 421 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms