RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
ITGA4-210ENST00000484404 TNKSO95271 1327 aa16.13■□□□□ 0.17
ITGA4-210ENST00000484404 BAZ2BQ9UIF8 2168 aaKnown RBP16.12■□□□□ 0.17
ITGA4-210ENST00000484404 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 C6orf222P0C671 652 aaPredicted RBP16.12■□□□□ 0.17
ITGA4-210ENST00000484404 PCP11498 1178 aaKnown RBP16.12■□□□□ 0.17
ITGA4-210ENST00000484404 CHMLP26374 656 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 BTNL9Q6UXG8 535 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
ITGA4-210ENST00000484404 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 IQCA1Q86XH1 822 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 ENAHQ8N8S7 591 aaPredicted RBP16.12■□□□□ 0.17
ITGA4-210ENST00000484404 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
ITGA4-210ENST00000484404 ABHD16BQ9H3Z7 469 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 PRKAG2Q9UGJ0 569 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 PHF24Q9UPV7 400 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
ITGA4-210ENST00000484404 PQBP1O60828 265 aaKnown RBP16.11■□□□□ 0.17
ITGA4-210ENST00000484404 CALML3P27482 149 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 BEX3Q00994 111 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 BAATQ14032 418 aaPredicted RBP16.11■□□□□ 0.17
ITGA4-210ENST00000484404 TMEM63BQ5T3F8 832 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 TTC14Q96N46 770 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 KATNBL1Q9H079 304 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 PDLIM7Q9NR12 457 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 PDGFCQ9NRA1 345 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 RAD50Q92878 1312 aa16.11■□□□□ 0.17
ITGA4-210ENST00000484404 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 LAMA3Q16787 3333 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
ITGA4-210ENST00000484404 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 BMP8BP34820 402 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 ACLYP53396 1101 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 TLE2Q04725 743 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 KCNA10Q16322 511 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 TDHQ8IZJ6 230 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 LBHD1Q9BQE6 289 aaPredicted RBP16.1■□□□□ 0.17
ITGA4-210ENST00000484404 UBAC1Q9BSL1 405 aa16.1■□□□□ 0.17
ITGA4-210ENST00000484404 A0A1W2PPC1 479 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 ASB14A6NK59 587 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 DUSP11O75319 330 aaKnown RBP16.09■□□□□ 0.17
ITGA4-210ENST00000484404 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 SNX17Q15036 470 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
ITGA4-210ENST00000484404 KRT23Q9C075 422 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 STARD7Q9NQZ5 370 aa16.09■□□□□ 0.17
ITGA4-210ENST00000484404 ASGR1P07306 291 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 CYP21A2P08686 494 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
ITGA4-210ENST00000484404 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
ITGA4-210ENST00000484404 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
ITGA4-210ENST00000484404 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 KLHDC9Q8NEP7 349 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 BADQ92934 168 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 VTI1AQ96AJ9 217 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
ITGA4-210ENST00000484404 SGSM2O43147 1006 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
ITGA4-210ENST00000484404 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 STOX1Q6ZVD7 989 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 Q7L0L9 218 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
ITGA4-210ENST00000484404 SPC25Q9HBM1 224 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 DOCK5Q9H7D0 1870 aa16.07■□□□□ 0.16
ITGA4-210ENST00000484404 GBF1Q92538 1859 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 CTAGE5O15320 804 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 CLTBP09497 229 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
ITGA4-210ENST00000484404 SMPD1P17405 629 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 ITGB8P26012 769 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 GJA9P57773 515 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 CCSAPQ6IQ19 270 aaPredicted RBP16.06■□□□□ 0.16
ITGA4-210ENST00000484404 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
ITGA4-210ENST00000484404 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
ITGA4-210ENST00000484404 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 MOXD2PA6NHM9 499 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 E7EWF7 191 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 DYNC1LI2O43237 492 aaPredicted RBP16.05■□□□□ 0.16
ITGA4-210ENST00000484404 CST5P28325 142 aaPredicted RBP16.05■□□□□ 0.16
ITGA4-210ENST00000484404 RPS6P62753 249 aaKnown RBP16.05■□□□□ 0.16
ITGA4-210ENST00000484404 TRDNQ13061 729 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 SEC23AQ15436 765 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 ASPRV1Q53RT3 343 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
ITGA4-210ENST00000484404 TAPT1Q6NXT6 567 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms