RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 WWC2Q6AWC2 1192 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 GALNT17Q6IS24 598 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 CYP4F22Q6NT55 531 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 FBXO18Q8NFZ0 1043 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 SMCR8Q8TEV9 937 aaPredicted RBP10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 PIBF1Q8WXW3 757 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 CAPNS2Q96L46 248 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 hCG_1642624A0A1W2PR95 340 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 VPS37CA5D8V6 355 aaPredicted RBP10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 STXBP3O00186 592 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 ALDH1A1P00352 501 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 SYT1P21579 422 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 GNA11P29992 359 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 DDIT3P35638 169 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 GCLCP48506 637 aaPredicted RBP10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 NLRP5P59047 1200 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 KRT40Q6A162 431 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 CCDC174Q6PII3 467 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 BICD2Q8TD16 824 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 GPKOWQ92917 476 aaPredicted RBP eCLIP10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 TEX13BQ9BXU2 312 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 MAF1Q9H063 256 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 VPS54Q9P1Q0 977 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 CCPG1Q9ULG6 757 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 MRPL11Q9Y3B7 192 aaKnown RBP10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 RLFQ13129 1914 aa10.38□□□□□ -0.75
SHROOM4-204ENST00000483955 THSD7BQ9C0I4 1608 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 MMP1P03956 469 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 KRT2P35908 639 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 TM4SF4P48230 202 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 FOSBP53539 338 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 GRM1Q13255 1194 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 GNL2Q13823 731 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 USH1GQ495M9 461 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 FAM43AQ8N2R8 423 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 SAMD3Q8N6K7 520 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 DAGLBQ8NCG7 672 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 CUL5Q93034 780 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 PHF20Q9BVI0 1012 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 ZMYND12Q9H0C1 365 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 C6orf50Q9HD87 102 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 RABGAP1Q9Y3P9 1069 aa10.37□□□□□ -0.75
SHROOM4-204ENST00000483955 ZNF536O15090 1300 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 DTNBO60941 627 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 SLC25A27O95847 323 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 MAP2K2P36507 400 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 ADCY7P51828 1080 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 SNAP25P60880 206 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 CCNA1P78396 465 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 KIF23Q02241 960 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 TMEM132BQ14DG7 1078 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 TAF1CQ15572 869 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 MCTP2Q6DN12 878 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 SNRNP48Q6IEG0 339 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 CPXCR1Q8N123 301 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 COA7Q96BR5 231 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 P2RX7Q99572 595 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 PTPN18Q99952 460 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 RAVER2Q9HCJ3 691 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 FBXO40Q9UH90 709 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 PCDHA4Q9UN74 947 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 MTMR6Q9Y217 621 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 ATP6V1DQ9Y5K8 247 aa10.36□□□□□ -0.75
SHROOM4-204ENST00000483955 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 RBBP6Q7Z6E9 1792 aaKnown RBP10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 SMCO2A6NFE2 343 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 IGF2BP3O00425 579 aaKnown RBP eCLIP10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 BRD1O95696 1058 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 ZSCAN22P10073 491 aaPredicted RBP10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 CYP2C8P10632 490 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 ALAS1P13196 640 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 HSPA6P17066 643 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 STAT3P40763 770 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 MRPL12P52815 198 aaKnown RBP10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 C1QTNF8P60827 252 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 ERVK-24P63145 666 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 GUCY1B3Q02153 619 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 PLS1Q14651 629 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 FAM110CQ1W6H9 321 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 MCTP1Q6DN14 999 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 BRAPQ7Z569 592 aa10.35□□□□□ -0.75
SHROOM4-204ENST00000483955 DIS3L2Q8IYB7 885 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms