RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 ATXN1P54253 815 aaKnown RBP4.39□□□□□ -1.71
PKP4-212ENST00000483881 ANKRD39Q53RE8 183 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 OVOS1Q6IE37 1185 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 ANKS3Q6ZW76 656 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 SPRED1Q7Z699 444 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 UBE3DQ7Z6J8 389 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 NOP9Q86U38 636 aaKnown RBP4.39□□□□□ -1.71
PKP4-212ENST00000483881 MFSD4AQ8N468 514 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 CRACR2BQ8N4Y2 399 aaPredicted RBP4.39□□□□□ -1.71
PKP4-212ENST00000483881 PDZD8Q8NEN9 1154 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 PIWIL2Q8TC59 973 aaKnown RBP4.39□□□□□ -1.71
PKP4-212ENST00000483881 ZNF669Q96BR6 464 aaPredicted RBP4.39□□□□□ -1.71
PKP4-212ENST00000483881 TRIT1Q9H3H1 467 aaKnown RBP4.39□□□□□ -1.71
PKP4-212ENST00000483881 ZNF408Q9H9D4 720 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 PRR13Q9NZ81 148 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 SHROOM4Q9ULL8 1493 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 FZD7O75084 574 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 ITGB3P05106 788 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 ENDOUP21128 410 aaKnown RBP4.38□□□□□ -1.71
PKP4-212ENST00000483881 NTF4P34130 210 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 ETFBP38117 255 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 PMS1P54277 932 aaKnown RBP4.38□□□□□ -1.71
PKP4-212ENST00000483881 SLURP1P55000 103 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 SLC7A5Q01650 507 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 RAB33AQ14088 237 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 CYB5RLQ6IPT4 315 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 CCDC81Q6ZN84 652 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 C22orf34Q6ZV56 151 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 DHX37Q8IY37 1157 aaKnown RBP4.38□□□□□ -1.71
PKP4-212ENST00000483881 RNF141Q8WVD5 230 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 SYTL4Q96C24 671 aaPredicted RBP4.38□□□□□ -1.71
PKP4-212ENST00000483881 MRFAP1L1Q96HT8 127 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 KIF2CQ99661 725 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 MIPEPQ99797 713 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 CCDC113Q9H0I3 377 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 GBP3Q9H0R5 595 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 CNTD2Q9H8S5 307 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 SUCOQ9UBS9 1254 aaKnown RBP4.38□□□□□ -1.71
PKP4-212ENST00000483881 MRVI1Q9Y6F6 885 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 CAPN6Q9Y6Q1 641 aa4.38□□□□□ -1.71
PKP4-212ENST00000483881 A0A087WZG4 1122 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 A0A1W2PQH9 124 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 UPK3BL1B0FP48 263 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 UPK3BL2E5RIL1 263 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 SMAD7O15105 426 aaKnown RBP4.37□□□□□ -1.71
PKP4-212ENST00000483881 DDAH1O94760 285 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 CANXP27824 592 aaKnown RBP4.37□□□□□ -1.71
PKP4-212ENST00000483881 GALK1P51570 392 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 IFRD2Q12894 506 aaPredicted RBP4.37□□□□□ -1.71
PKP4-212ENST00000483881 KLF10Q13118 480 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 GNPTABQ3T906 1256 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 ZC3H12BQ5HYM0 836 aaKnown RBP4.37□□□□□ -1.71
PKP4-212ENST00000483881 UNC5AQ6ZN44 842 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 EEPD1Q7L9B9 569 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 DHX38Q92620 1227 aaKnown RBP4.37□□□□□ -1.71
PKP4-212ENST00000483881 PWWP2AQ96N64 755 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 C8orf49Q96NF6 230 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 RBM15Q96T37 977 aaKnown RBP eCLIP4.37□□□□□ -1.71
PKP4-212ENST00000483881 APBA2Q99767 749 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 FBRSQ9HAH7 460 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 SIRT5Q9NXA8 310 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 ING1Q9UK53 422 aaPredicted RBP4.37□□□□□ -1.71
PKP4-212ENST00000483881 SRCAPQ6ZRS2 3230 aa4.37□□□□□ -1.71
PKP4-212ENST00000483881 IGSF3O75054 1194 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 PPM1BO75688 479 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 APPP05067 770 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 NOP2P46087 812 aaKnown RBP4.36□□□□□ -1.71
PKP4-212ENST00000483881 NKG7Q16617 165 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 POMZP3Q6PJE2 187 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 VHLLQ6RSH7 139 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 CCDC144CPQ8IYA2 1237 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 KREMEN1Q96MU8 473 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 SLC9A7Q96T83 725 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 GPATCH2Q9NW75 528 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 ZNF214Q9UL59 606 aaPredicted RBP4.36□□□□□ -1.71
PKP4-212ENST00000483881 DIS3Q9Y2L1 958 aaKnown RBP4.36□□□□□ -1.71
PKP4-212ENST00000483881 PCDHB12Q9Y5F1 795 aa4.36□□□□□ -1.71
PKP4-212ENST00000483881 ANKRD34BA5PLL1 514 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 WASH4PA8MWX3 477 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 NOP56O00567 594 aaKnown RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 FFAR3O14843 346 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 KLF4O43474 513 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 SLITRK5O94991 958 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 ZGLP1P0C6A0 271 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 CDK11BP21127 795 aaKnown RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 NR0B2Q15466 257 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 CLEC16AQ2KHT3 1053 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 NOL9Q5SY16 702 aaKnown RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 NBPF12Q5TAG4 269 aaPredicted RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 LARP1BQ659C4 914 aaKnown RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 HEATR6Q6AI08 1181 aaKnown RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 USP51Q70EK9 711 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 CDH24Q86UP0 819 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 ST13P5Q8NFI4 369 aaPredicted RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 PMFBP1Q8TBY8 1022 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 SH3RF3Q8TEJ3 882 aaPredicted RBP4.35□□□□□ -1.71
PKP4-212ENST00000483881 XAGE3Q8WTP9 111 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 SHISA4Q96DD7 197 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 SLC6A18Q96N87 628 aa4.35□□□□□ -1.71
PKP4-212ENST00000483881 IPO9Q96P70 1041 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms