RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 HOXA7P31268 230 aaPredicted RBP13.47□□□□□ -0.25
SND1-210ENST00000483503 TNNI2P48788 182 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 TERF1P54274 439 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 UBASH3AP57075 661 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 KLRC3Q07444 240 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 CALML4Q96GE6 196 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 XPO4Q9C0E2 1151 aaKnown RBP13.47□□□□□ -0.25
SND1-210ENST00000483503 TAOK3Q9H2K8 898 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 KCNF1Q9H3M0 494 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 SH2D4AQ9H788 454 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
SND1-210ENST00000483503 FAM196BA6NMK8 535 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 RAD21O60216 631 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 GDF11O95390 407 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 CDK11BP21127 795 aaKnown RBP13.46□□□□□ -0.25
SND1-210ENST00000483503 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.25
SND1-210ENST00000483503 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
SND1-210ENST00000483503 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.254e-8■■■■■ 33.6
SND1-210ENST00000483503 AMPD3Q01432 767 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 AP3B2Q13367 1082 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 PDIA5Q14554 519 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 CALCRLQ16602 461 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 SYDE2Q5VT97 1194 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 SPATA1Q5VX52 437 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 BTNL9Q6UXG8 535 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 CABP7Q86V35 215 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 AMNQ9BXJ7 453 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 LRRC27Q9C0I9 530 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 PCDHA1Q9Y5I3 950 aa13.46□□□□□ -0.25
SND1-210ENST00000483503 NDUFB10O96000 172 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 FOSP01100 380 aaPredicted RBP13.45□□□□□ -0.26
SND1-210ENST00000483503 RPN1P04843 607 aaKnown RBP13.45□□□□□ -0.26
SND1-210ENST00000483503 SLC16A2P36021 539 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 PPP1R2P41236 205 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 IKQ13123 557 aaPredicted RBP13.45□□□□□ -0.26
SND1-210ENST00000483503 STIM1Q13586 685 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 KCNB1Q14721 858 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 KARSQ15046 597 aaKnown RBP13.45□□□□□ -0.26
SND1-210ENST00000483503 CDC37Q16543 378 aaPredicted RBP13.45□□□□□ -0.26
SND1-210ENST00000483503 FBXO11Q86XK2 927 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 GINM1Q9NU53 330 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 FANCLQ9NW38 375 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 TMEM260Q9NX78 707 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 NRBP1Q9UHY1 535 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 NFE2L3Q9Y4A8 694 aa13.45□□□□□ -0.26
SND1-210ENST00000483503 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
SND1-210ENST00000483503 USP11P51784 963 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 CXCL9Q07325 125 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 CUL4BQ13620 913 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
SND1-210ENST00000483503 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 ZNF658Q5TYW1 1059 aaPredicted RBP13.44□□□□□ -0.26
SND1-210ENST00000483503 MOXD1Q6UVY6 613 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 TMC6Q7Z403 805 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 ZBED3Q96IU2 234 aaPredicted RBP13.44□□□□□ -0.26
SND1-210ENST00000483503 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 HSD3B7Q9H2F3 369 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 STK17AQ9UEE5 414 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 LRWD1Q9UFC0 647 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 PYCARDQ9ULZ3 195 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
SND1-210ENST00000483503 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 CNTNAP1P78357 1384 aa13.44□□□□□ -0.26
SND1-210ENST00000483503 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 TMEM232C9JQI7 657 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 MARCH6O60337 910 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 ZNF18P17022 549 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
SND1-210ENST00000483503 SPAG1Q07617 926 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 FILIP1LQ4L180 1135 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
SND1-210ENST00000483503 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 CACTINQ8WUQ7 758 aaKnown RBP13.43□□□□□ -0.26
SND1-210ENST00000483503 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
SND1-210ENST00000483503 KBTBD4Q9NVX7 518 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 RWDD2AQ9UIY3 292 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 TMX2Q9Y320 296 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
SND1-210ENST00000483503 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
SND1-210ENST00000483503 PPP1R3GB7ZBB8 358 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms