RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
RAB11FIP3-209ENST00000483002 DDX49Q9Y6V7 483 aaKnown RBP19.56■□□□□ 0.72
RAB11FIP3-209ENST00000483002 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 TOP1P11387 765 aaKnown RBP19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 BEX3Q00994 111 aa19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 FPGSQ05932 587 aa19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 TICAM2Q86XR7 235 aa19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 GPCPD1Q9NPB8 672 aa19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 CYP39A1Q9NYL5 469 aa19.55■□□□□ 0.72
RAB11FIP3-209ENST00000483002 FRMPD2Q68DX3 1309 aaPredicted RBP19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 ICAM1P05362 532 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 CDK7P50613 346 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 AAMPQ13685 434 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 MFSD6Q6ZSS7 791 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 EEPD1Q7L9B9 569 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 RNPC3Q96LT9 517 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 PURBQ96QR8 312 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 TCP11L1Q9NUJ3 509 aa19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 LAMA2P24043 3122 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-209ENST00000483002 CCDC171Q6TFL3 1326 aa19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 CTAGE5O15320 804 aa19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 AKNAD1Q5T1N1 836 aa19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 SYDE2Q5VT97 1194 aa19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 BTNL9Q6UXG8 535 aa19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 RANBP17Q9H2T7 1088 aaKnown RBP19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 PDGFCQ9NRA1 345 aa19.53■□□□□ 0.72
RAB11FIP3-209ENST00000483002 ASTN1O14525 1302 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 MROH7Q68CQ1 1323 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 ARVCFO00192 962 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 DYNC1LI2O43237 492 aaPredicted RBP19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 TIMP1P01033 207 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 IGHDP01880 384 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 SDSP20132 328 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 SMAD3P84022 425 aaKnown RBP19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 PLEKHM2Q8IWE5 1019 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 AP5M1Q9H0R1 490 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 SEMA6BQ9H3T3 888 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 TBX21Q9UL17 535 aa19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 GNEQ9Y223 722 aaKnown RBP19.52■□□□□ 0.72
RAB11FIP3-209ENST00000483002 ZMYM6O95789 1325 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 SMPD1P17405 629 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 PTGS1P23219 599 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 MFAP1P55081 439 aaKnown RBP19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 BAATQ14032 418 aaPredicted RBP19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 IQSEC1Q6DN90 963 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CXCL17Q6UXB2 119 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TLK2Q86UE8 772 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 FBXO16Q8IX29 292 aaPredicted RBP19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TTC14Q96N46 770 aa19.51■□□□□ 0.71
RAB11FIP3-209ENST00000483002 A0A0C4DFX4 3053 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 NFIBO00712 420 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 PDHBP11177 359 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 NKX3-2P78367 333 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 FSCN1Q16658 493 aaKnown RBP19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TMEM63BQ5T3F8 832 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TAPT1Q6NXT6 567 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TBC1D10CQ8IV04 446 aa19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CDX2Q99626 313 aaPredicted RBP19.5■□□□□ 0.71
RAB11FIP3-209ENST00000483002 PTPDC1A2A3K4 754 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ZNF213O14771 459 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TLR3O15455 904 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 PCP11498 1178 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 NUCB1Q02818 461 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 MFSD5Q6N075 450 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CWC27Q6UX04 472 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 KIAA1211Q6ZU35 1233 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 FAM126BQ8IXS8 530 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ZKSCAN3Q9BRR0 538 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 PPP1R12CQ9BZL4 782 aa19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 RNF41Q9H4P4 317 aaPredicted RBP19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ADD3Q9UEY8 706 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ZEB2O60315 1214 aa19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ZNF543Q08ER8 600 aa19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ESR2Q92731 530 aa19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TTYH1Q9H313 450 aaPredicted RBP19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 OSBPL3Q9H4L5 887 aa19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 VTA1Q9NP79 307 aa19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 DIAPH3Q9NSV4 1193 aa19.48■□□□□ 0.71
RAB11FIP3-209ENST00000483002 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CABYRO75952 493 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CSF2RAP15509 400 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CALML3P27482 149 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ALDH5A1P51649 535 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 ITGA7Q13683 1181 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 TMEM199Q8N511 208 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 MORC4Q8TE76 937 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 Q9Y3F1 56 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 NEDD4P46934 1319 aa19.47■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CUL9Q8IWT3 2517 aa19.46■□□□□ 0.71
RAB11FIP3-209ENST00000483002 CD4P01730 458 aa19.46■□□□□ 0.71
RAB11FIP3-209ENST00000483002 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
RAB11FIP3-209ENST00000483002 PPIGQ13427 754 aaKnown RBP eCLIP19.46■□□□□ 0.713e-8■■□□□ 11.4
RAB11FIP3-209ENST00000483002 RNF207Q6ZRF8 634 aa19.46■□□□□ 0.71
RAB11FIP3-209ENST00000483002 C16orf59Q7L2K0 433 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms