RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 MCMDC2Q4G0Z9 681 aa13.59□□□□□ -0.23
EPHB3-203ENST00000482987 RRP12Q5JTH9 1297 aaKnown RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 GNASQ5JWF2 1037 aa13.59□□□□□ -0.23
EPHB3-203ENST00000482987 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
EPHB3-203ENST00000482987 PCSK9Q8NBP7 692 aaKnown RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
EPHB3-203ENST00000482987 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 CDX2Q99626 313 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
EPHB3-203ENST00000482987 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 SEMA6BQ9H3T3 888 aa13.59□□□□□ -0.23
EPHB3-203ENST00000482987 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 GNEQ9Y223 722 aaKnown RBP13.59□□□□□ -0.23
EPHB3-203ENST00000482987 PRUNE2Q8WUY3 3088 aa13.58□□□□□ -0.23
EPHB3-203ENST00000482987 ASB14A6NK59 587 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 TIMP1P01033 207 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 ICAM1P05362 532 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 HAND2P61296 217 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 BTNL9Q6UXG8 535 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 FBXO16Q8IX29 292 aaPredicted RBP13.58□□□□□ -0.24
EPHB3-203ENST00000482987 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 SPC25Q9HBM1 224 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 TOMM22Q9NS69 142 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 CCPG1Q9ULG6 757 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
EPHB3-203ENST00000482987 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
EPHB3-203ENST00000482987 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
EPHB3-203ENST00000482987 ARVCFO00192 962 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 NFIBO00712 420 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 TOP1P11387 765 aaKnown RBP13.57□□□□□ -0.24
EPHB3-203ENST00000482987 SMPD1P17405 629 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 NSMFQ6X4W1 530 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 C16orf59Q7L2K0 433 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
EPHB3-203ENST00000482987 CD4P01730 458 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 PDHBP11177 359 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
EPHB3-203ENST00000482987 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
EPHB3-203ENST00000482987 TICAM2Q86XR7 235 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 SLC43A3Q8NBI5 491 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 MORC4Q8TE76 937 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 VTI1AQ96AJ9 217 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
EPHB3-203ENST00000482987 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 GRIN2DO15399 1336 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 MROH7Q68CQ1 1323 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
EPHB3-203ENST00000482987 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
EPHB3-203ENST00000482987 IGHDP01880 384 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 CSF2RAP15509 400 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 FSCN1Q16658 493 aaKnown RBP13.55□□□□□ -0.24
EPHB3-203ENST00000482987 AKNAD1Q5T1N1 836 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.24
EPHB3-203ENST00000482987 CLEC4DQ8WXI8 215 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 NEDD4P46934 1319 aa13.55□□□□□ -0.24
EPHB3-203ENST00000482987 LRRC37A2A6NM11 1700 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 SDSP20132 328 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 TMEM240Q5SV17 173 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 IQSEC1Q6DN90 963 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 OSBPL3Q9H4L5 887 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 UMODL1Q5DID0 1318 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 MCM3APO60318 1980 aa13.54□□□□□ -0.24
EPHB3-203ENST00000482987 TMEM265A0A087WTH1 108 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 ACRP10323 421 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 DNAJB2P25686 324 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 CYP2C18P33260 490 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 ALDH5A1P51649 535 aaPredicted RBP13.53□□□□□ -0.24
EPHB3-203ENST00000482987 PSMC6P62333 389 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 NUCB1Q02818 461 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.24
EPHB3-203ENST00000482987 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 KIAA1211Q6ZU35 1233 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 CHD1LQ86WJ1 897 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
EPHB3-203ENST00000482987 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms