RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 DDX49Q9Y6V7 483 aaKnown RBP15.27■□□□□ 0.04
TMEM54-206ENST00000482771 ASB14A6NK59 587 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 GPAA1O43292 621 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 ZEB2O60315 1214 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 TSPY3P0CV98 308 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 TSPY8P0CW00 308 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 SMPD1P17405 629 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 RABGGTBP53611 331 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 TFAP4Q01664 338 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 IKQ13123 557 aaPredicted RBP15.26■□□□□ 0.03
TMEM54-206ENST00000482771 IQSEC1Q6DN90 963 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 EEPD1Q7L9B9 569 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 IFNL3Q8IZI9 196 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 EPB41L4AQ9HCS5 686 aaPredicted RBP15.26■□□□□ 0.03
TMEM54-206ENST00000482771 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
TMEM54-206ENST00000482771 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
TMEM54-206ENST00000482771 MCM3APO60318 1980 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 CHD9Q3L8U1 2897 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 M0R2C6 588 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 ALAS1P13196 640 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 GNAT2P19087 354 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 MCCP23508 829 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 STAT2P52630 851 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 SNAP25P60880 206 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 PSMC6P62333 389 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 TMEM63BQ5T3F8 832 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 TLK2Q86UE8 772 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
TMEM54-206ENST00000482771 IL27Q8NEV9 243 aa15.25■□□□□ 0.03
TMEM54-206ENST00000482771 UHRF1Q96T88 793 aaPredicted RBP15.25■□□□□ 0.03
TMEM54-206ENST00000482771 NOC4LQ9BVI4 516 aaKnown RBP15.25■□□□□ 0.03
TMEM54-206ENST00000482771 ZNF536O15090 1300 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
TMEM54-206ENST00000482771 MYOGP15173 224 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 SLC1A4P43007 532 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 PDE4BQ07343 736 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 TSHZ3Q63HK5 1081 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 TAPT1Q6NXT6 567 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 FAM160B2Q86V87 743 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 MIER1Q8N108 512 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 SEZ6LQ9BYH1 1024 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 SLC4A7Q9Y6M7 1214 aa15.24■□□□□ 0.03
TMEM54-206ENST00000482771 B4GALT4O60513 344 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 KIAA1211Q6ZU35 1233 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 MICALL1Q8N3F8 863 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 SCLYQ96I15 445 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
TMEM54-206ENST00000482771 Q9Y3F1 56 aa15.23■□□□□ 0.03
TMEM54-206ENST00000482771 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 SLC3A2P08195 630 aaKnown RBP15.22■□□□□ 0.03
TMEM54-206ENST00000482771 MUM1L1Q5H9M0 696 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 PPP2R2DQ66LE6 453 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 FBXO16Q8IX29 292 aaPredicted RBP15.22■□□□□ 0.03
TMEM54-206ENST00000482771 VWCEQ96DN2 955 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 GPATCH3Q96I76 525 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 PURBQ96QR8 312 aaKnown RBP15.22■□□□□ 0.03
TMEM54-206ENST00000482771 SEC62Q99442 399 aaKnown RBP15.22■□□□□ 0.03
TMEM54-206ENST00000482771 INCENPQ9NQS7 918 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 CYP39A1Q9NYL5 469 aa15.22■□□□□ 0.03
TMEM54-206ENST00000482771 GREB1LQ9C091 1923 aaPredicted RBP15.21■□□□□ 0.03
TMEM54-206ENST00000482771 PLA2G6O60733 806 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 BMP1P13497 986 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 PPARAQ07869 468 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 NSMFQ6X4W1 530 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 NECAB3Q96P71 396 aaPredicted RBP15.21■□□□□ 0.03
TMEM54-206ENST00000482771 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
TMEM54-206ENST00000482771 PRR12Q9ULL5 1215 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 STX8Q9UNK0 236 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 MTMR7Q9Y216 660 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 PCDHA11Q9Y5I1 949 aa15.21■□□□□ 0.03
TMEM54-206ENST00000482771 RFXAPO00287 272 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 CYP2C9P11712 490 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 ATP2A2P16615 1042 aaKnown RBP15.2■□□□□ 0.02
TMEM54-206ENST00000482771 TTLL4Q14679 1199 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
TMEM54-206ENST00000482771 DEFB128Q7Z7B8 93 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 NAPBQ9H115 298 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 DCTPP1Q9H773 170 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 VTA1Q9NP79 307 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 IL17RBQ9NRM6 502 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
TMEM54-206ENST00000482771 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
TMEM54-206ENST00000482771 PRRC2BQ5JSZ5 2229 aaKnown RBP15.2■□□□□ 0.02
TMEM54-206ENST00000482771 MYH7P12883 1935 aa15.19■□□□□ 0.02
TMEM54-206ENST00000482771 NMT2O60551 498 aa15.19■□□□□ 0.02
TMEM54-206ENST00000482771 SUPT20HL2P0C7V6 817 aa15.19■□□□□ 0.02
TMEM54-206ENST00000482771 TFF2Q03403 129 aa15.19■□□□□ 0.02
TMEM54-206ENST00000482771 BAATQ14032 418 aaPredicted RBP15.19■□□□□ 0.02
TMEM54-206ENST00000482771 SKIV2LQ15477 1246 aaKnown RBP15.19■□□□□ 0.02
TMEM54-206ENST00000482771 DUSP28Q4G0W2 176 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms