RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 NAA15Q9BXJ9 866 aaKnown RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 RWDD2AQ9UIY3 292 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 LRRC37A3O60309 1634 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 PPEF1O14829 653 aaPredicted RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 CFBP00751 764 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 FCER1AP12319 257 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 RCAN1P53805 252 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 MRPS25P82663 173 aaKnown RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 CT47A1Q5JQC4 288 aaPredicted RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 MRPL44Q9H9J2 332 aaKnown RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 DDX25Q9UHL0 483 aaKnown RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 MRC1P22897 1456 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 BBOX1O75936 387 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 DNM2P50570 870 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 DPYDQ12882 1025 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 PRPF4BQ13523 1007 aaKnown RBP10.19□□□□□ -0.78
CALD1-220ENST00000482470 TRIM14Q14142 442 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 IQCEQ6IPM2 695 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 POTEDQ86YR6 584 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 CHP1Q99653 195 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 LRRC27Q9C0I9 530 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 ANAPC4Q9UJX5 808 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
CALD1-220ENST00000482470 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 TDP2O95551 362 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 AKR1B1P15121 316 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 ZFYVE27Q5T4F4 411 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 ARL6IP4Q66PJ3 421 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 TTBK2Q6IQ55 1244 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 USP17L6PQ6QN14 398 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 SYCP3Q8IZU3 236 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 ERMNQ8TAM6 284 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 SMCR8Q8TEV9 937 aaPredicted RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 P2RX5Q93086 422 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 GTPBP4Q9BZE4 634 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 TFR2Q9UP52 801 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 PHLPP2Q6ZVD8 1323 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 DDX39AO00148 427 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 MEIS1O00470 390 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 KIF20AO95235 890 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 MAGEA1P43355 309 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 UBXN2AP68543 259 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 HLTFQ14527 1009 aaKnown RBP eCLIP10.18□□□□□ -0.784e-6■■□□□ 14.4
CALD1-220ENST00000482470 GRM4Q14833 912 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 CERKLQ49MI3 558 aaPredicted RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 DNAJC21Q5F1R6 531 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 RAD9BQ6WBX8 426 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 CCDC65Q8IXS2 484 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 EHBP1Q8NDI1 1231 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 PARD6BQ9BYG5 372 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
CALD1-220ENST00000482470 BARHL2Q9NY43 387 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 ADGRG1Q9Y653 693 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 LMO7Q8WWI1 1683 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 TTC26A0AVF1 554 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 CTIFO43310 598 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 RASA1P20936 1047 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 OAS2P29728 719 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 NR1I3Q14994 352 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 UTP14CQ5TAP6 766 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 CCDC174Q6PII3 467 aa10.18□□□□□ -0.78
CALD1-220ENST00000482470 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
CALD1-220ENST00000482470 POTEB2H3BUK9 544 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 BUB1O43683 1085 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 SMC1AQ14683 1233 aaKnown RBP10.17□□□□□ -0.78
CALD1-220ENST00000482470 MAP9Q49MG5 647 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 SLFN13Q68D06 897 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 GALNT17Q6IS24 598 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 ZCCHC17Q9NP64 241 aaKnown RBP10.17□□□□□ -0.78
CALD1-220ENST00000482470 ADD3Q9UEY8 706 aaKnown RBP10.17□□□□□ -0.78
CALD1-220ENST00000482470 CDC23Q9UJX2 597 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 PPP1R12BO60237 982 aaPredicted RBP10.17□□□□□ -0.78
CALD1-220ENST00000482470 SRGAP2O75044 1071 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 TTLL1O95922 423 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 GYS2P54840 703 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 ANKRD7Q92527 254 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 CCDC51Q96ER9 411 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 IFIH1Q9BYX4 1025 aaKnown RBP10.17□□□□□ -0.78
CALD1-220ENST00000482470 IL17RBQ9NRM6 502 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 MYO6Q9UM54 1294 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 KIF1AQ12756 1690 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 A0A1B0GTH6 734 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 CLRN2A0PK11 232 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 TCP10L2B9ZVM9 353 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms