RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CCNA1P78396 465 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 SP3Q02447 781 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-208ENST00000482310 MUM1L1Q5H9M0 696 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 NSUN7Q8NE18 718 aaKnown RBP15.29■□□□□ 0.04
HDAC1-208ENST00000482310 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 TRERF1Q96PN7 1200 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-208ENST00000482310 MORF4L1Q9UBU8 362 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 PRPF3O43395 683 aaKnown RBP15.28■□□□□ 0.04
HDAC1-208ENST00000482310 OAZ1P54368 228 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 WWC2Q6AWC2 1192 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 RIOX2Q8IUF8 465 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 ZNF296Q8WUU4 475 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-208ENST00000482310 SNX21Q969T3 373 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 AMNQ9BXJ7 453 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 RNF26Q9BY78 433 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-208ENST00000482310 TSHZ2Q9NRE2 1034 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 PCDHA1Q9Y5I3 950 aa15.28■□□□□ 0.04
HDAC1-208ENST00000482310 MYH7BA7E2Y1 1941 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 NFIBO00712 420 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 FKTNO75072 461 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 HSP90AA1P07900 732 aaKnown RBP15.27■□□□□ 0.04
HDAC1-208ENST00000482310 SCG2P13521 617 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 CTGFP29279 349 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 PSMC4P43686 418 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 NAPAP54920 295 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 CAP1Q01518 475 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 KIF22Q14807 665 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 PKN1Q16512 942 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 NSMFQ6X4W1 530 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 CFHR5Q9BXR6 569 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 VPS54Q9P1Q0 977 aa15.27■□□□□ 0.04
HDAC1-208ENST00000482310 ZNF236Q9UL36 1845 aa15.27■□□□□ 0.03
HDAC1-208ENST00000482310 ABCB11O95342 1321 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 TNPO2O14787 897 aaKnown RBP15.26■□□□□ 0.03
HDAC1-208ENST00000482310 ATP2A1O14983 1001 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 DEXIO95424 95 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
HDAC1-208ENST00000482310 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
HDAC1-208ENST00000482310 GPR142Q7Z601 462 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 MMP19Q99542 508 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 ACAD9Q9H845 621 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 GJB4Q9NTQ9 266 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 IVNS1ABPQ9Y6Y0 642 aa15.26■□□□□ 0.03
HDAC1-208ENST00000482310 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 STXBP3O00186 592 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 SLC25A27O95847 323 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
HDAC1-208ENST00000482310 GJB2P29033 226 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 ANP32AP39687 249 aaKnown RBP15.25■□□□□ 0.03
HDAC1-208ENST00000482310 FCGRTP55899 365 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 PLEKHH3Q7Z736 793 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 FAM184AQ8NB25 1140 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 ALG1Q9BT22 464 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 SMC3Q9UQE7 1217 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 MRPL11Q9Y3B7 192 aaKnown RBP15.25■□□□□ 0.03
HDAC1-208ENST00000482310 KIAA1217Q5T5P2 1943 aa15.25■□□□□ 0.03
HDAC1-208ENST00000482310 LRRC37A2A6NM11 1700 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 CFBP00751 764 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 PGK2P07205 417 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 CALML3P27482 149 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 MAPK4P31152 587 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
HDAC1-208ENST00000482310 GUCY1B3Q02153 619 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 BECN1Q14457 450 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 SLC30A10Q6XR72 485 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 ANKRD35Q8N283 1001 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 CLEC4DQ8WXI8 215 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 ERO1AQ96HE7 468 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
HDAC1-208ENST00000482310 MROH8Q9H579 483 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 RBM27Q9P2N5 1060 aaKnown RBP15.24■□□□□ 0.03
HDAC1-208ENST00000482310 KCNJ14Q9UNX9 436 aa15.24■□□□□ 0.03
HDAC1-208ENST00000482310 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
HDAC1-208ENST00000482310 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 FCER1AP12319 257 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 COPB2P35606 906 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 CUL4AQ13619 759 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 KCTD2Q14681 263 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 UBE2SQ16763 222 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 TKFCQ3LXA3 575 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 SHCBP1Q8NEM2 672 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 SHISA4Q96DD7 197 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
HDAC1-208ENST00000482310 A1CFQ9NQ94 594 aaKnown RBP15.23■□□□□ 0.03
HDAC1-208ENST00000482310 BARHL2Q9NY43 387 aa15.23■□□□□ 0.03
HDAC1-208ENST00000482310 SMCO2A6NFE2 343 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 OPLAHO14841 1288 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 ADORA2AP29274 412 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 NLRP5P59047 1200 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms