RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PRDM5Q9NQX1 630 aaPredicted RBP23.27■■□□□ 1.32
MSH5-215ENST00000482280 PHF24Q9UPV7 400 aa23.27■■□□□ 1.32
MSH5-215ENST00000482280 C6orf222P0C671 652 aaPredicted RBP23.26■■□□□ 1.31
MSH5-215ENST00000482280 CENPQQ7L2Z9 268 aaPredicted RBP23.26■■□□□ 1.31
MSH5-215ENST00000482280 PCSK9Q8NBP7 692 aaKnown RBP23.26■■□□□ 1.31
MSH5-215ENST00000482280 ANKS1AQ92625 1134 aa23.26■■□□□ 1.31
MSH5-215ENST00000482280 LENG1Q96BZ8 264 aaPredicted RBP23.26■■□□□ 1.31
MSH5-215ENST00000482280 GDF15Q99988 308 aa23.26■■□□□ 1.31
MSH5-215ENST00000482280 SYNRGQ9UMZ2 1314 aa23.26■■□□□ 1.31
MSH5-215ENST00000482280 SOWAHBA6NEL2 793 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 MOXD2PA6NHM9 499 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 B4DLN1 442 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 SGSM2O43147 1006 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 MRPL12P52815 198 aaKnown RBP23.25■■□□□ 1.31
MSH5-215ENST00000482280 BAATQ14032 418 aaPredicted RBP23.25■■□□□ 1.31
MSH5-215ENST00000482280 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 IL25Q9H293 177 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 PRO3102Q9H379 93 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 ALPK3Q96L96 1907 aa23.25■■□□□ 1.31
MSH5-215ENST00000482280 CEP290O15078 2479 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 A0A1W2PQ45 241 aaPredicted RBP23.24■■□□□ 1.31
MSH5-215ENST00000482280 A0A1W2PQY0 241 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 CALML3P27482 149 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
MSH5-215ENST00000482280 TNFAIP2Q03169 654 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 USH1GQ495M9 461 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 TRIM60Q495X7 471 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 RNF207Q6ZRF8 634 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 NCOA7Q8NI08 942 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 FGD4Q96M96 766 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 GLT1D1Q96MS3 346 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 UBA5Q9GZZ9 404 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 STARD7Q9NQZ5 370 aa23.24■■□□□ 1.31
MSH5-215ENST00000482280 NFIBO00712 420 aa23.23■■□□□ 1.31
MSH5-215ENST00000482280 ADAMTS4O75173 837 aa23.23■■□□□ 1.31
MSH5-215ENST00000482280 ACLYP53396 1101 aa23.23■■□□□ 1.31
MSH5-215ENST00000482280 PTH1RQ03431 593 aa23.23■■□□□ 1.31
MSH5-215ENST00000482280 AP5M1Q9H0R1 490 aa23.23■■□□□ 1.31
MSH5-215ENST00000482280 LOC102724159A0A0B4J2E5 919 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 IFIT3O14879 490 aaKnown RBP23.22■■□□□ 1.31
MSH5-215ENST00000482280 CYP21A2P08686 494 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 PWP2Q15269 919 aaKnown RBP23.22■■□□□ 1.31
MSH5-215ENST00000482280 KCNA10Q16322 511 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 CDC37Q16543 378 aaPredicted RBP23.22■■□□□ 1.31
MSH5-215ENST00000482280 GNASQ5JWF2 1037 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 C1orf53Q5VUE5 145 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 EEPD1Q7L9B9 569 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 TDHQ8IZJ6 230 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 VTA1Q9NP79 307 aa23.22■■□□□ 1.31
MSH5-215ENST00000482280 SNX17Q15036 470 aa23.21■■□□□ 1.31
MSH5-215ENST00000482280 CASC1Q6TDU7 716 aa23.21■■□□□ 1.31
MSH5-215ENST00000482280 ADGRF4Q8IZF3 695 aa23.21■■□□□ 1.31
MSH5-215ENST00000482280 VAT1LQ9HCJ6 419 aa23.21■■□□□ 1.31
MSH5-215ENST00000482280 ABCB11O95342 1321 aa23.21■■□□□ 1.31
MSH5-215ENST00000482280 DCDC2CA8MYV0 355 aa23.2■■□□□ 1.3
MSH5-215ENST00000482280 ZEB2O60315 1214 aa23.2■■□□□ 1.3
MSH5-215ENST00000482280 PQBP1O60828 265 aaKnown RBP23.2■■□□□ 1.3
MSH5-215ENST00000482280 CST5P28325 142 aaPredicted RBP23.2■■□□□ 1.3
MSH5-215ENST00000482280 ALDH5A1P51649 535 aaPredicted RBP23.2■■□□□ 1.3
MSH5-215ENST00000482280 GJA9P57773 515 aa23.2■■□□□ 1.3
MSH5-215ENST00000482280 PDE4DQ08499 809 aa23.2■■□□□ 1.3
MSH5-215ENST00000482280 IQSEC1Q6DN90 963 aa23.2■■□□□ 1.3
MSH5-215ENST00000482280 MCF2L2Q86YR7 1114 aa23.2■■□□□ 1.3
MSH5-215ENST00000482280 MROH7Q68CQ1 1323 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 E7EWF7 191 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 TLE2Q04725 743 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 WTAPQ15007 396 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 CYB5R4Q7L1T6 521 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 FBXO11Q86XK2 927 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 FBXO16Q8IX29 292 aaPredicted RBP23.19■■□□□ 1.3
MSH5-215ENST00000482280 KLHDC9Q8NEP7 349 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 UPF3AQ9H1J1 476 aaKnown RBP23.19■■□□□ 1.3
MSH5-215ENST00000482280 CPVLQ9H3G5 476 aa23.19■■□□□ 1.3
MSH5-215ENST00000482280 MRPL11Q9Y3B7 192 aaKnown RBP23.19■■□□□ 1.3
MSH5-215ENST00000482280 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
MSH5-215ENST00000482280 ASGR1P07306 291 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 CLTBP09497 229 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 RPS6P62753 249 aaKnown RBP23.18■■□□□ 1.3
MSH5-215ENST00000482280 TRAF1Q13077 416 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 SLC30A10Q6XR72 485 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 DNERQ8NFT8 737 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 CLEC4DQ8WXI8 215 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 MAP4K1Q92918 833 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 MAF1Q9H063 256 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 KATNBL1Q9H079 304 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 PCDH10Q9P2E7 1040 aa23.18■■□□□ 1.3
MSH5-215ENST00000482280 ELP1O95163 1332 aa23.17■■□□□ 1.3
MSH5-215ENST00000482280 KLRF2D3W0D1 207 aa23.17■■□□□ 1.3
MSH5-215ENST00000482280 TMEM67Q5HYA8 995 aa23.17■■□□□ 1.3
MSH5-215ENST00000482280 CATIPQ7Z7H3 387 aa23.17■■□□□ 1.3
MSH5-215ENST00000482280 RGS22Q8NE09 1264 aa23.17■■□□□ 1.3
MSH5-215ENST00000482280 PURBQ96QR8 312 aaKnown RBP23.17■■□□□ 1.3
MSH5-215ENST00000482280 DYNC1LI2O43237 492 aaPredicted RBP23.16■■□□□ 1.3
MSH5-215ENST00000482280 SEC23AQ15436 765 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 FSCN1Q16658 493 aaKnown RBP23.16■■□□□ 1.3
MSH5-215ENST00000482280 QRICH1Q2TAL8 776 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 AMNQ9BXJ7 453 aa23.16■■□□□ 1.3
MSH5-215ENST00000482280 ANO2Q9NQ90 1003 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms