RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ZNF70Q9UC06 446 aaPredicted RBP16.36■□□□□ 0.21
CHD3-211ENST00000481999 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
CHD3-211ENST00000481999 TDP2O95551 362 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 SLFN14P0C7P3 912 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
CHD3-211ENST00000481999 KIAA1755Q5JYT7 1200 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 CNTNAP1P78357 1384 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L15C9J2P7 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L13C9JLJ4 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L11C9JVI0 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L18D6R9N7 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L22D6RA61 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L17D6RBQ6 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L19D6RCP7 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L20D6RJB6 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 F5H6K3 240 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 SLC37A4O43826 429 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 NRDCO43847 1150 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 STX17P56962 302 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 KLRC3Q07444 240 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 NCBP1Q09161 790 aaKnown RBP16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L24Q0WX57 530 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 CUL4BQ13620 913 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHD3-211ENST00000481999 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
CHD3-211ENST00000481999 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 USP17L6PQ6QN14 398 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
CHD3-211ENST00000481999 TMC6Q7Z403 805 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 ZNF592Q92610 1267 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
CHD3-211ENST00000481999 MYO3BQ8WXR4 1341 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHD3-211ENST00000481999 TNNI2P48788 182 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 NIM1KQ8IY84 436 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 KANSL2Q9H9L4 492 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHD3-211ENST00000481999 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
CHD3-211ENST00000481999 NFKBIEO00221 500 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 BMP15O95972 392 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 GNA11P29992 359 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 KCNJ6P48051 423 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 MYL5Q02045 173 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 MORC3Q14149 939 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 NAALADL2Q58DX5 795 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 NT5DC1Q5TFE4 455 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 PDXDC2PQ6P474 469 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 MAPK8IP1Q9UQF2 711 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
CHD3-211ENST00000481999 MYO1BO43795 1136 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 NDUFB10O96000 172 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 TECP42680 631 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 FANCCQ00597 558 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 RASSF7Q02833 373 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 DPYDQ12882 1025 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 USH1GQ495M9 461 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 SH3RF1Q7Z6J0 888 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 ELOA2Q8IYF1 753 aaPredicted RBP16.33■□□□□ 0.2
CHD3-211ENST00000481999 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
CHD3-211ENST00000481999 ATRNL1Q5VV63 1379 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 ZBTB5O15062 677 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 ADCY7P51828 1080 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 PRELPP51888 382 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 IKQ13123 557 aaPredicted RBP16.33■□□□□ 0.2
CHD3-211ENST00000481999 RASSF8Q8NHQ8 419 aa16.33■□□□□ 0.2
CHD3-211ENST00000481999 P2RX7Q99572 595 aaKnown RBP16.33■□□□□ 0.2
CHD3-211ENST00000481999 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
CHD3-211ENST00000481999 HOOK1Q9UJC3 728 aaKnown RBP16.33■□□□□ 0.2
CHD3-211ENST00000481999 PSME4Q14997 1843 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 TMEM232C9JQI7 657 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 WNT10BO00744 389 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 ARMCX5Q6P1M9 558 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 FHDC1Q9C0D6 1143 aaPredicted RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 ENTPD3O75355 529 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 TXKP42681 527 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 GOLGA8FQ08AF8 430 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 GOLGA8DPQ0D2H9 430 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 GPATCH4Q5T3I0 446 aaKnown RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
CHD3-211ENST00000481999 SMAP1Q8IYB5 467 aaPredicted RBP16.32■□□□□ 0.2
CHD3-211ENST00000481999 KIF18AQ8NI77 898 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms