RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, human

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM1A-204	ENST00000481879	BICRAL	Q6AI39	1079 aa		4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	LSR	Q86X29	649 aa	Predicted RBP	4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	FNIP1	Q8TF40	1166 aa		4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	NT5C1A	Q9BXI3	368 aa		4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	SRRT	Q9BXP5	876 aa	Known RBP	4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	PDLIM7	Q9NR12	457 aa		4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	HCFC2	Q9Y5Z7	792 aa		4.59	□□□□□ -1.67
KDM1A-204	ENST00000481879	FAM86C2P	A6NEL3	165 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879		C9IYK1	514 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879		F8W031	263 aa	Predicted RBP	4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	SHOX	O15266	292 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	FGF10	O15520	208 aa	Predicted RBP	4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	PLA2G1B	P04054	148 aa	Known RBP	4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	ATF2	P15336	505 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	FBLN1	P23142	703 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	PRR5	P85299	388 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	VWA3B	Q502W6	1294 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	ANKRD39	Q53RE8	183 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	NT5DC1	Q5TFE4	455 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	CYP2R1	Q6VVX0	501 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	LIPI	Q6XZB0	460 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	ADGRG2	Q8IZP9	1017 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	RGS22	Q8NE09	1264 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	USP40	Q9NVE5	1235 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	CNOT11	Q9UKZ1	510 aa	Known RBP	4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	FAN1	Q9Y2M0	1017 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879	PMF1-BGLAP	U3KQ54	211 aa		4.58	□□□□□ -1.68
KDM1A-204	ENST00000481879		A0A1B0GTL3	188 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879		H0Y8X5	98 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	TBC1D8	O95759	1140 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	ACR	P10323	421 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	NCAM1	P13591	858 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	INSRR	P14616	1297 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	PMS1	P54277	932 aa	Known RBP	4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	ZNF445	P59923	1031 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	HHIPL2	Q6UWX4	724 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	SAPCD2	Q86UD0	394 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	USP48	Q86UV5	1035 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	NLGN2	Q8NFZ4	835 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	SMARCC1	Q92922	1105 aa	Predicted RBP	4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	GPR20	Q99678	358 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	SPATA25	Q9BR10	227 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	RNF38	Q9H0F5	515 aa		4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	DBR1	Q9UK59	544 aa	Known RBP	4.57	□□□□□ -1.68
KDM1A-204	ENST00000481879	SH3D21	A4FU49	640 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879		K7ESM1	405 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	CORO7	P57737	925 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	HTRA3	P83110	453 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	FERMT3	Q86UX7	667 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	ZNF526	Q8TF50	670 aa	Predicted RBP	4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	BRF1	Q92994	677 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	PTCHD1	Q96NR3	888 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	FCRL3	Q96P31	734 aa	Predicted RBP	4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	GP6	Q9HCN6	339 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	PALD1	Q9ULE6	856 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	PLA2G2D	Q9UNK4	145 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	MYRF	Q9Y2G1	1151 aa		4.56	□□□□□ -1.68
KDM1A-204	ENST00000481879	IMPDH2	P12268	514 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	CD247	P20963	164 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	TACR1	P25103	407 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	L1CAM	P32004	1257 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.55	□□□□□ -1.68	1e-9	■■□□□ 11.8
KDM1A-204	ENST00000481879	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	TDRD10	Q5VZ19	366 aa	Known RBP	4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	DCAF15	Q66K64	600 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	KIAA0825	Q8IV33	1275 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	FIBCD1	Q8N539	461 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	TAB3	Q8N5C8	712 aa	Predicted RBP	4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	SPON2	Q9BUD6	331 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	WDR26	Q9H7D7	661 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	ZNRF3	Q9ULT6	936 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	SF3B6	Q9Y3B4	125 aa	Known RBP	4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	FHOD1	Q9Y613	1164 aa		4.55	□□□□□ -1.68
KDM1A-204	ENST00000481879	TP53	P04637	393 aa	Predicted RBP	4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	ASGR2	P07307	311 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	POU4F1	Q01851	419 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	ZNF827	Q17R98	1081 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	PPFIBP1	Q86W92	1011 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	CARF	Q8N187	725 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	ALG3	Q92685	438 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	TM9SF2	Q99805	663 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879	ZNF451	Q9Y4E5	1061 aa		4.54	□□□□□ -1.68
KDM1A-204	ENST00000481879		A0A087WZG4	1122 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	AKAP8	O43823	692 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	NOBOX	O60393	691 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	CD3E	P07766	207 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	GLI4	P10075	376 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	ITGA4	P13612	1032 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	PDIA4	P13667	645 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	IFNGR1	P15260	489 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	MC3R	P41968	323 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	DLX2	Q07687	328 aa	Predicted RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	MRPL58	Q14197	206 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	CCDC27	Q2M243	656 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	ZNF326	Q5BKZ1	582 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	B3GNT8	Q7Z7M8	397 aa		4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	DDX1	Q92499	740 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	NOL6	Q9H6R4	1146 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	DIS3	Q9Y2L1	958 aa	Known RBP	4.53	□□□□□ -1.68
KDM1A-204	ENST00000481879	DUSP10	Q9Y6W6	482 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms