RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 Q9Y3F1 56 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 ASB14A6NK59 587 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 ARVCFO00192 962 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 ORC4O43929 436 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 PQBP1O60828 265 aaKnown RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 ASGR1P07306 291 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 PDE4AP27815 886 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 SLC1A4P43007 532 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 PDE1AP54750 535 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 RASIP1Q5U651 963 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 MFSD5Q6N075 450 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 CCDC144CPQ8IYA2 1237 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 SLC43A3Q8NBI5 491 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 MORC4Q8TE76 937 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 LENG1Q96BZ8 264 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 A1CFQ9NQ94 594 aaKnown RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
GARNL3-217ENST00000481875 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 GNEQ9Y223 722 aaKnown RBP13.67□□□□□ -0.22
GARNL3-217ENST00000481875 LCTP09848 1927 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-217ENST00000481875 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 CABYRO75952 493 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-217ENST00000481875 GNASQ5JWF2 1037 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 BTNL9Q6UXG8 535 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
GARNL3-217ENST00000481875 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 CHD7Q9P2D1 2997 aa13.66□□□□□ -0.22
GARNL3-217ENST00000481875 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 CD4P01730 458 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 CNTN2Q02246 1040 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 IQSEC1Q6DN90 963 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 CCDC174Q6PII3 467 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 FAM126BQ8IXS8 530 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 COL25A1Q9BXS0 654 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-217ENST00000481875 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
GARNL3-217ENST00000481875 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 MCCP23508 829 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 TNFAIP2Q03169 654 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.23
GARNL3-217ENST00000481875 C16orf59Q7L2K0 433 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 FAM161BQ96MY7 647 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 TRERF1Q96PN7 1200 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 MAF1Q9H063 256 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 PRR12Q9ULL5 1215 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 STX8Q9UNK0 236 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 ASTN1O14525 1302 aa13.64□□□□□ -0.23
GARNL3-217ENST00000481875 TRANK1O15050 2925 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 ICAM1P05362 532 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 PCP11498 1178 aaKnown RBP13.63□□□□□ -0.23
GARNL3-217ENST00000481875 NT5C2P49902 561 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 TMEM240Q5SV17 173 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 TAPT1Q6NXT6 567 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 MAFAQ8NHW3 353 aaPredicted RBP13.63□□□□□ -0.23
GARNL3-217ENST00000481875 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 TTC14Q96N46 770 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
GARNL3-217ENST00000481875 RANBP17Q9H2T7 1088 aaKnown RBP13.63□□□□□ -0.23
GARNL3-217ENST00000481875 OSBPL3Q9H4L5 887 aa13.63□□□□□ -0.23
GARNL3-217ENST00000481875 TLR3O15455 904 aaKnown RBP13.62□□□□□ -0.23
GARNL3-217ENST00000481875 DNAJB2P25686 324 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-217ENST00000481875 GSE1Q14687 1217 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 KCTD1Q719H9 257 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 VTA1Q9NP79 307 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 HOMER2Q9NSB8 354 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
GARNL3-217ENST00000481875 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-217ENST00000481875 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
GARNL3-217ENST00000481875 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 ZEB2O60315 1214 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 NMT2O60551 498 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 FGAP02671 866 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 TOP1P11387 765 aaKnown RBP13.61□□□□□ -0.23
GARNL3-217ENST00000481875 ALAS1P13196 640 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 SMPD1P17405 629 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 FSCN1Q16658 493 aaKnown RBP13.61□□□□□ -0.23
GARNL3-217ENST00000481875 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms