RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PDHBP11177 359 aa21.85■■□□□ 1.09
CLK1-211ENST00000481641 PTGS1P23219 599 aa21.85■■□□□ 1.09
CLK1-211ENST00000481641 IRX6P78412 446 aaPredicted RBP21.85■■□□□ 1.09
CLK1-211ENST00000481641 C9orf50Q5SZB4 431 aa21.85■■□□□ 1.09
CLK1-211ENST00000481641 LAMA2P24043 3122 aaKnown RBP21.85■■□□□ 1.09
CLK1-211ENST00000481641 LCTP09848 1927 aa21.84■■□□□ 1.09
CLK1-211ENST00000481641 CLTBP09497 229 aa21.84■■□□□ 1.09
CLK1-211ENST00000481641 PDE4AP27815 886 aa21.84■■□□□ 1.09
CLK1-211ENST00000481641 GJA9P57773 515 aa21.84■■□□□ 1.09
CLK1-211ENST00000481641 SHHQ15465 462 aa21.84■■□□□ 1.09
CLK1-211ENST00000481641 UPF3AQ9H1J1 476 aaKnown RBP21.84■■□□□ 1.09
CLK1-211ENST00000481641 MOXD2PA6NHM9 499 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 ASB14A6NK59 587 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 NFIBO00712 420 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 ASGR1P07306 291 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 PCP11498 1178 aaKnown RBP21.83■■□□□ 1.09
CLK1-211ENST00000481641 BEX3Q00994 111 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 GPR153Q6NV75 609 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 NOL8Q76FK4 1167 aaKnown RBP21.83■■□□□ 1.09
CLK1-211ENST00000481641 EEPD1Q7L9B9 569 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 NUP133Q8WUM0 1156 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 ESR2Q92731 530 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 TTC14Q96N46 770 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 IL25Q9H293 177 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 RNF41Q9H4P4 317 aaPredicted RBP21.83■■□□□ 1.09
CLK1-211ENST00000481641 PDGFCQ9NRA1 345 aa21.83■■□□□ 1.09
CLK1-211ENST00000481641 CTAGE5O15320 804 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 GOLGA8HP0CJ92 632 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 CST5P28325 142 aaPredicted RBP21.82■■□□□ 1.08
CLK1-211ENST00000481641 TNFAIP2Q03169 654 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 ZNF543Q08ER8 600 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 FAAP100Q0VG06 881 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 BAATQ14032 418 aaPredicted RBP21.82■■□□□ 1.08
CLK1-211ENST00000481641 GNASQ5JWF2 1037 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 TMEM63BQ5T3F8 832 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 FBXO16Q8IX29 292 aaPredicted RBP21.82■■□□□ 1.08
CLK1-211ENST00000481641 VTI1AQ96AJ9 217 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 CPVLQ9H3G5 476 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 SPC25Q9HBM1 224 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 LAMA4Q16363 1823 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 COL6A3P12111 3177 aa21.82■■□□□ 1.08
CLK1-211ENST00000481641 LRRC37A2A6NM11 1700 aa21.81■■□□□ 1.08
CLK1-211ENST00000481641 B4E1Z4 1266 aa21.81■■□□□ 1.08
CLK1-211ENST00000481641 HIP1O00291 1037 aa21.81■■□□□ 1.08
CLK1-211ENST00000481641 KDM4AO75164 1064 aa21.81■■□□□ 1.08
CLK1-211ENST00000481641 PCSK9Q8NBP7 692 aaKnown RBP21.81■■□□□ 1.08
CLK1-211ENST00000481641 TMEM39AQ9NV64 488 aa21.81■■□□□ 1.08
CLK1-211ENST00000481641 KIAA0355O15063 1070 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 SNHG28P0DPA3 235 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 GSPT1P15170 499 aaKnown RBP21.8■■□□□ 1.08
CLK1-211ENST00000481641 SMPD1P17405 629 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 EPHB4P54760 987 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 TAPT1Q6NXT6 567 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 ANKRD33Q7Z3H0 272 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 GLT1D1Q96MS3 346 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 DSCC1Q9BVC3 393 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 UBA5Q9GZZ9 404 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 MTMR10Q9NXD2 777 aa21.8■■□□□ 1.08
CLK1-211ENST00000481641 GNEQ9Y223 722 aaKnown RBP21.8■■□□□ 1.08
CLK1-211ENST00000481641 PTPDC1A2A3K4 754 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 DCDC2CA8MYV0 355 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 RAG1P15918 1043 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 SLC30A10Q6XR72 485 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 CLEC4DQ8WXI8 215 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 TOX2Q96NM4 488 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 ELP1O95163 1332 aa21.79■■□□□ 1.08
CLK1-211ENST00000481641 DYNC1LI2O43237 492 aaPredicted RBP21.78■■□□□ 1.08
CLK1-211ENST00000481641 CALML3P27482 149 aa21.78■■□□□ 1.08
CLK1-211ENST00000481641 CDK7P50613 346 aa21.78■■□□□ 1.08
CLK1-211ENST00000481641 TTC22Q5TAA0 569 aa21.78■■□□□ 1.08
CLK1-211ENST00000481641 TLK2Q86UE8 772 aa21.78■■□□□ 1.08
CLK1-211ENST00000481641 DGKHQ86XP1 1220 aa21.78■■□□□ 1.08
CLK1-211ENST00000481641 ZSWIM5Q9P217 1185 aa21.78■■□□□ 1.08
CLK1-211ENST00000481641 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
CLK1-211ENST00000481641 ALDH5A1P51649 535 aaPredicted RBP21.77■■□□□ 1.08
CLK1-211ENST00000481641 IMMTQ16891 758 aaKnown RBP21.77■■□□□ 1.08
CLK1-211ENST00000481641 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
CLK1-211ENST00000481641 PNMA1Q8ND90 353 aa21.77■■□□□ 1.08
CLK1-211ENST00000481641 MORC4Q8TE76 937 aa21.77■■□□□ 1.08
CLK1-211ENST00000481641 FAM161BQ96MY7 647 aa21.77■■□□□ 1.08
CLK1-211ENST00000481641 ZSCAN10Q96SZ4 725 aaPredicted RBP21.77■■□□□ 1.08
CLK1-211ENST00000481641 ARVCFO00192 962 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 NKX3-2P78367 333 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 USH1GQ495M9 461 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 IQSEC1Q6DN90 963 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 CXCL17Q6UXB2 119 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 KIAA1211Q6ZU35 1233 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 ENAHQ8N8S7 591 aaPredicted RBP21.76■■□□□ 1.07
CLK1-211ENST00000481641 AP5M1Q9H0R1 490 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 KAT14Q9H8E8 782 aa21.76■■□□□ 1.07
CLK1-211ENST00000481641 FSCN1Q16658 493 aaKnown RBP21.75■■□□□ 1.07
CLK1-211ENST00000481641 GPATCH4Q5T3I0 446 aaKnown RBP21.75■■□□□ 1.07
CLK1-211ENST00000481641 RNF207Q6ZRF8 634 aa21.75■■□□□ 1.07
CLK1-211ENST00000481641 VTA1Q9NP79 307 aa21.75■■□□□ 1.07
CLK1-211ENST00000481641 ADD3Q9UEY8 706 aaKnown RBP21.75■■□□□ 1.07
CLK1-211ENST00000481641 CTNNA3Q9UI47 895 aa21.75■■□□□ 1.07
CLK1-211ENST00000481641 TBX21Q9UL17 535 aa21.75■■□□□ 1.07
CLK1-211ENST00000481641 TNKSO95271 1327 aa21.75■■□□□ 1.07
CLK1-211ENST00000481641 RPS6P62753 249 aaKnown RBP21.74■■□□□ 1.07
CLK1-211ENST00000481641 FPGSQ05932 587 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms