RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 IQCA1Q86XH1 822 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 MORC4Q8TE76 937 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 SEZ6LQ9BYH1 1024 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 PRDM5Q9NQX1 630 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 CYP39A1Q9NYL5 469 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 ADD3Q9UEY8 706 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 Q9Y3F1 56 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 RAD50Q92878 1312 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 KIAA0355O15063 1070 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 C6orf222P0C671 652 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 HAND2P61296 217 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 CNTN2Q02246 1040 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 ZNF543Q08ER8 600 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 KCNA10Q16322 511 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 CCDC174Q6PII3 467 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 CWC27Q6UX04 472 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 TBC1D10CQ8IV04 446 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 VTA1Q9NP79 307 aa14.26□□□□□ -0.13
SQSTM1-207ENST00000481335 SOWAHBA6NEL2 793 aa14.25□□□□□ -0.13
SQSTM1-207ENST00000481335 DCDC2CA8MYV0 355 aa14.25□□□□□ -0.13
SQSTM1-207ENST00000481335 CABYRO75952 493 aa14.25□□□□□ -0.13
SQSTM1-207ENST00000481335 IMMTQ16891 758 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-207ENST00000481335 MPHOSPH6Q99547 160 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-207ENST00000481335 CNNM2Q9H8M5 875 aa14.25□□□□□ -0.13
SQSTM1-207ENST00000481335 NEDD4P46934 1319 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 TRIM43BA6NCK2 446 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 ADCY6O43306 1168 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 PQBP1O60828 265 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 ASGR1P07306 291 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 MUM1L1Q5H9M0 696 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 IQSEC1Q6DN90 963 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 NSMFQ6X4W1 530 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 RASGRP2Q7LDG7 609 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 DEFB123Q8N688 67 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 ANKS1AQ92625 1134 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 BADQ92934 168 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 TRIM43Q96BQ3 446 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 KRT23Q9C075 422 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-207ENST00000481335 ASTN1O14525 1302 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 FRMPD2Q68DX3 1309 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 ZEB2O60315 1214 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 RAG1P15918 1043 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 CDK7P50613 346 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 GNASQ5JWF2 1037 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 TTBK2Q6IQ55 1244 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 TLK2Q86UE8 772 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 DNERQ8NFT8 737 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 TMEM39AQ9NV64 488 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 STXBP5LQ9Y2K9 1186 aa14.23□□□□□ -0.13
SQSTM1-207ENST00000481335 B4DLN1 442 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 ARVCFO00192 962 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 CTAGE5O15320 804 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 SLC16A2P36021 539 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 ALDH5A1P51649 535 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 SMAD3P84022 425 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 FAAP100Q0VG06 881 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 ASPRV1Q53RT3 343 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 PNMA1Q8ND90 353 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 RGS22Q8NE09 1264 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 AP5M1Q9H0R1 490 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 KAT14Q9H8E8 782 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 GPCPD1Q9NPB8 672 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 MTMR10Q9NXD2 777 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 TBX21Q9UL17 535 aa14.22□□□□□ -0.13
SQSTM1-207ENST00000481335 TMEM265A0A087WTH1 108 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 NFIBO00712 420 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 KDM4AO75164 1064 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 SNAP25P60880 206 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 FPGSQ05932 587 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 FSCN1Q16658 493 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 TTC22Q5TAA0 569 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 TAPT1Q6NXT6 567 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 RNF207Q6ZRF8 634 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 CLEC4DQ8WXI8 215 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-207ENST00000481335 TNKSO95271 1327 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 RBM47A0AV96 593 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 B4E1Z4 1266 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 NKRFO15226 690 aaKnown RBP eCLIP14.2□□□□□ -0.144e-8■□□□□ 9.4
SQSTM1-207ENST00000481335 TIMP1P01033 207 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 SMPD1P17405 629 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 SHHQ15465 462 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms