RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 CYP2C9P11712 490 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 EEF2P13639 858 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 UBE3CQ15386 1083 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 C16orf86Q6ZW13 317 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 TMCO2Q7Z6W1 182 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 HERC6Q8IVU3 1022 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 REPS2Q8NFH8 660 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 FGD4Q96M96 766 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 SLC9A7Q96T83 725 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 MTUS1Q9ULD2 1270 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 DDX19BQ9UMR2 479 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 ADAMTS5Q9UNA0 930 aa11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 PFKMP08237 780 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 ABHD16BQ9H3Z7 469 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 TRMT13Q9NUP7 481 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 ZNF318Q5VUA4 2279 aa11.3□□□□□ -0.6
SMARCE1-210ENST00000481231 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 RBAK-RBAKDNI3L0D1 243 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 FAM83BQ5T0W9 1011 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 CTR9Q6PD62 1173 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 TLK2Q86UE8 772 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
SMARCE1-210ENST00000481231 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 RAD21O60216 631 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 CABYRO75952 493 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 ACTN1P12814 892 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 COPB2P35606 906 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 NKX3-2P78367 333 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 TNFAIP2Q03169 654 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 FSCN1Q16658 493 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 IER5LQ5T953 404 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 CCDC144CPQ8IYA2 1237 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 PHOSPHO2Q8TCD6 241 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 TEX13BQ9BXU2 312 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 ALDH8A1Q9H2A2 487 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 SUGCTQ9HAC7 445 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 FAM86C1Q9NVL1 165 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 C5orf42Q9H799 3197 aa11.28□□□□□ -0.6
SMARCE1-210ENST00000481231 SMARCA5O60264 1052 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 GFRA3O60609 400 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 FOXK2Q01167 660 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 ZP2Q05996 745 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 MFSD14AQ96MC6 490 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 STRBPQ96SI9 672 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 FTOQ9C0B1 505 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 ARPP21Q9UBL0 812 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 BAZ2AQ9UIF9 1905 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-210ENST00000481231 SCN5AQ14524 2016 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 TRIOO75962 3097 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 GSG1L2A8MUP6 293 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 NDUFB10O96000 172 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 RASA1P20936 1047 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 PTPN5P54829 565 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 DIEXFQ68CQ4 756 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 SLF1Q9BQI6 1058 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 MUTYHQ9UIF7 546 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 TNKSO95271 1327 aa11.26□□□□□ -0.61
SMARCE1-210ENST00000481231 F5H6K3 240 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 DYNC1LI2O43237 492 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 SMPD1P17405 629 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 IRS1P35568 1242 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 CNTN2Q02246 1040 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 KLRC3Q07444 240 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 TCF15Q12870 199 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms