RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SYPP08247 313 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 SDSP20132 328 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 HOXA10P31260 410 aaPredicted RBP7.45□□□□□ -1.22
UPF3A-207ENST00000481131 IFI16Q16666 785 aaKnown RBP7.45□□□□□ -1.22
UPF3A-207ENST00000481131 LINC00116Q8NCU8 138 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 GSTCDQ8NEC7 633 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 NETO1Q8TDF5 533 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 MFSD3Q96ES6 412 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 FOXP3Q9BZS1 431 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 SLC52A2Q9HAB3 445 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 BACE2Q9Y5Z0 518 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 ASXL2Q76L83 1435 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 A0A087X0B3 334 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 C2orf71A6NGG8 1288 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 ADAMTS4O75173 837 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 CPP00450 1065 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 ESR1P03372 595 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 VIL1P09327 827 aaKnown RBP7.44□□□□□ -1.22
UPF3A-207ENST00000481131 FOSL1P15407 271 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 CD97P48960 835 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 NBPF11Q86T75 865 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 SLC51AQ86UW1 340 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 THNSL2Q86YJ6 484 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 ATP13A1Q9HD20 1204 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 NDOR1Q9UHB4 597 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 SFMBT1Q9UHJ3 866 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 TMEFF2Q9UIK5 374 aaPredicted RBP7.44□□□□□ -1.22
UPF3A-207ENST00000481131 TCFL5Q9UL49 500 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 PCDHA11Q9Y5I1 949 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 COL4A3BPQ9Y5P4 624 aa7.44□□□□□ -1.22
UPF3A-207ENST00000481131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.43□□□□□ -1.22
UPF3A-207ENST00000481131 PPM1GO15355 546 aaPredicted RBP7.43□□□□□ -1.22
UPF3A-207ENST00000481131 DNAJC8O75937 253 aaPredicted RBP7.43□□□□□ -1.22
UPF3A-207ENST00000481131 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
UPF3A-207ENST00000481131 GABREP78334 506 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 RCSD1Q6JBY9 416 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 KCNT2Q6UVM3 1135 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 USP53Q70EK8 1073 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 BRAPQ7Z569 592 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 FGD2Q7Z6J4 655 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 CCDC103Q8IW40 242 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 SCLYQ96I15 445 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 PCDH12Q9NPG4 1184 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 DUSP13Q9UII6 198 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 SNX11Q9Y5W9 270 aa7.43□□□□□ -1.22
UPF3A-207ENST00000481131 TMEM265A0A087WTH1 108 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 TMEM82A0PJX8 343 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 FAM83GA6ND36 823 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 FKTNO75072 461 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 GSTM1P09488 218 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 PCBP3P57721 371 aaKnown RBP7.42□□□□□ -1.22
UPF3A-207ENST00000481131 AMPD3Q01432 767 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 TEKQ02763 1124 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 TAF7LQ5H9L4 462 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 STYK1Q6J9G0 422 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 ZPBP2Q6X784 338 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 RNF111Q6ZNA4 994 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 KRTAP1-3Q8IUG1 177 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 CREG2Q8IUH2 290 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 PTPRN2Q92932 1015 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 BRINP2Q9C0B6 783 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 CLEC1BQ9P126 229 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 TRAF6Q9Y4K3 522 aa7.42□□□□□ -1.22
UPF3A-207ENST00000481131 MYCLP1P12525 358 aaPredicted RBP7.41□□□□□ -1.22
UPF3A-207ENST00000481131 PLS3P13797 630 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 NOP2P46087 812 aaKnown RBP7.41□□□□□ -1.22
UPF3A-207ENST00000481131 CEBPAP49715 358 aaPredicted RBP7.41□□□□□ -1.22
UPF3A-207ENST00000481131 TESK1Q15569 626 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
UPF3A-207ENST00000481131 TMPRSS7Q7RTY8 843 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 PPIL6Q8IXY8 311 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 ANKRD13AQ8IZ07 590 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 NPFFR2Q9Y5X5 522 aa7.41□□□□□ -1.22
UPF3A-207ENST00000481131 GSG1L2A8MUP6 293 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
UPF3A-207ENST00000481131 POU3F3P20264 500 aaPredicted RBP7.4□□□□□ -1.22
UPF3A-207ENST00000481131 LTKP29376 864 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 SEPHS1P49903 392 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 MBLAC2Q68D91 279 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 MAMDC2Q7Z304 686 aaPredicted RBP7.4□□□□□ -1.22
UPF3A-207ENST00000481131 KRT26Q7Z3Y9 468 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 DCAF4Q8WV16 495 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 TARS2Q9BW92 718 aaKnown RBP7.4□□□□□ -1.22
UPF3A-207ENST00000481131 FAM126AQ9BYI3 521 aaPredicted RBP7.4□□□□□ -1.22
UPF3A-207ENST00000481131 TMX1Q9H3N1 280 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 PCMTD2Q9NV79 361 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 ZNF281Q9Y2X9 895 aa7.4□□□□□ -1.22
UPF3A-207ENST00000481131 PDE8AO60658 829 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 MSCO60682 206 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 RASGRP1O95267 797 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 LCP1P13796 627 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 CD96P40200 585 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 EGR3Q06889 387 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 ZNF460Q14592 562 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 EEF1DP3Q658K8 133 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 LRRTM3Q86VH5 581 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 PTCHD1Q96NR3 888 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms