RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 WNT7AO00755 349 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 ZBED4O75132 1171 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 CEP152O94986 1710 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 NQO1P15559 274 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 S100A1P23297 94 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 TNFRSF8P28908 595 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 PCK1P35558 622 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 GUCY2FP51841 1108 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 EPHB4P54760 987 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 CSE1LP55060 971 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 CEBPZQ03701 1054 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 KLC3Q6P597 504 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 SLC35F6Q8N357 371 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 TTC39CQ8N584 583 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 KCTD17Q8N5Z5 321 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 GDAP1Q8TB36 358 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 TANGO6Q9C0B7 1094 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 HSD3B7Q9H2F3 369 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 UPP2O95045 317 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 LARGE1O95461 756 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 GNAZP19086 355 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 PRKAR2BP31323 418 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 RFC5P40937 340 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 IQCEQ6IPM2 695 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 MIGA1Q8NAN2 632 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 DQX1Q8TE96 717 aaKnown RBP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 ATP8B4Q8TF62 1192 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 LENG1Q96BZ8 264 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 SLF1Q9BQI6 1058 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 TM6SF1Q9BZW5 370 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 DLGAP2Q9P1A6 1054 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 KIAA1468Q9P260 1216 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 RCOR1Q9UKL0 485 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 ACADVLP49748 655 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 ITGB3BPQ13352 177 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 ITIH4Q14624 930 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 P3H1Q32P28 736 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 CFAP100Q494V2 611 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 DAB2IPQ5VWQ8 1189 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 FAM173BQ6P4H8 233 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 FERMT3Q86UX7 667 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 SETDB2Q96T68 719 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 HNRNPABQ99729 332 aaKnown RBP11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC68Q9H2F9 335 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC87Q9NVE4 849 aa11.4□□□□□ -0.58
PRPF4B-206ENST00000481109 A0A0J9YVX5 310 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SERPINC1P01008 464 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 ASLP04424 464 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SERPINB8P50452 374 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 MCL1Q07820 350 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 ST3GAL1Q11201 340 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SPIDRQ14159 915 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 CFAP58Q5T655 872 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 GRAMD4Q6IC98 578 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 KANK3Q6NY19 840 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SLC2A7Q6PXP3 512 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 MYO1HQ8N1T3 1032 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 FAM136AQ96C01 138 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 ATP6V1G3Q96LB4 118 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 GDAP1L1Q96MZ0 367 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SEC62Q99442 399 aaKnown RBP11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 LZTFL1Q9NQ48 299 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 MKS1Q9NXB0 559 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 CTTNBP2NLQ9P2B4 639 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SEL1LQ9UBV2 794 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SALL3Q9BXA9 1300 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SPHKAPQ2M3C7 1700 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 BTBD19C9JJ37 291 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 HNRNPRO43390 633 aaKnown RBP11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 CCDC159P0C7I6 412 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 ENDOUP21128 410 aaKnown RBP11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 ATP11AP98196 1134 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 CDK17Q00537 523 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 PPIDQ08752 370 aaKnown RBP11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 DMPKQ09013 629 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 CLEC4GQ6UXB4 293 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 BPHLQ86WA6 291 aaPredicted RBP11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 DESI2Q9BSY9 194 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 SLC7A5P2Q9GIP4 190 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
PRPF4B-206ENST00000481109 TBKBP1A7MCY6 615 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 HIP1RO75146 1068 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms