RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 LGR4Q9BXB1 951 aa8.88□□□□□ -0.99
GTF3C3-211ENST00000481098 ACSL6Q9UKU0 697 aa8.88□□□□□ -0.99
GTF3C3-211ENST00000481098 TAF6LQ9Y6J9 622 aa8.88□□□□□ -0.99
GTF3C3-211ENST00000481098 TRBV23OR9-2A0A075B6M9 112 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 TBX1O43435 398 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 SCG5P05408 212 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 SEPHS1P49903 392 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 CORO7P57737 925 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 CYP4F3Q08477 520 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 RASGRF1Q13972 1273 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 IRF2BP1Q8IU81 584 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 NLGN2Q8NFZ4 835 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 CCDC140Q96MF4 163 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 SLC6A17Q9H1V8 727 aa8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 PPP1R1BQ9UD71 204 aaPredicted RBP8.87□□□□□ -0.99
GTF3C3-211ENST00000481098 PNLIPP16233 465 aa8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 HOXC12P31275 282 aa8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 RBM10P98175 930 aaKnown RBP8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 KSR1Q8IVT5 923 aa8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 BTN2A2Q8WVV5 523 aa8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 PPP1R14AQ96A00 147 aa8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 INTS4Q96HW7 963 aaKnown RBP8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 LRP2BPQ9P2M1 347 aa8.86□□□□□ -0.99
GTF3C3-211ENST00000481098 A0A1W2PQU0 124 aa8.85□□□□□ -0.99
GTF3C3-211ENST00000481098 IQCA1LA6NCM1 817 aa8.85□□□□□ -0.99
GTF3C3-211ENST00000481098 PDPK1O15530 556 aa8.85□□□□□ -0.99
GTF3C3-211ENST00000481098 SCRN1Q12765 414 aa8.85□□□□□ -0.99
GTF3C3-211ENST00000481098 TESK1Q15569 626 aa8.85□□□□□ -0.99
GTF3C3-211ENST00000481098 DRC1Q96MC2 740 aa8.85□□□□□ -0.99
GTF3C3-211ENST00000481098 PPP2R2AP63151 447 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 LAPTM5Q13571 262 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 MPZL3Q6UWV2 235 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 POU5F2Q8N7G0 328 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 NPLOC4Q8TAT6 608 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 MKL1Q969V6 931 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 IMPACTQ9P2X3 320 aa8.84□□□□□ -0.99
GTF3C3-211ENST00000481098 LRRC10BA6NIK2 292 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 THBDP07204 575 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 PAMP19021 973 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 L1CAMP32004 1257 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 GFRA1P56159 465 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 RASA3Q14644 834 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 OGFOD2Q6N063 350 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 JAMLQ86YT9 394 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 MMP19Q99542 508 aa8.83□□□□□ -1
GTF3C3-211ENST00000481098 NPHP3-ACAD11A0A0J9YXS1 232 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 CPP00450 1065 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 PRKCAP17252 672 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 ERVFRD-1P60508 538 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 MVKQ03426 396 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 ACBD5Q5T8D3 534 aaPredicted RBP8.82□□□□□ -1
GTF3C3-211ENST00000481098 LRRC47Q8N1G4 583 aaKnown RBP8.82□□□□□ -1
GTF3C3-211ENST00000481098 FRS2Q8WU20 508 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 UBXN4Q92575 508 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 C1orf159Q96HA4 380 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
GTF3C3-211ENST00000481098 HRKO00198 91 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 PLS3P13797 630 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 HSP90AA2PQ14568 343 aaPredicted RBP8.81□□□□□ -1
GTF3C3-211ENST00000481098 KIR3DS1Q14943 382 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 E4F1Q66K89 784 aaPredicted RBP8.81□□□□□ -1
GTF3C3-211ENST00000481098 PRR23BQ6ZRT6 265 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 KREMEN2Q8NCW0 462 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 NUP43Q8NFH3 380 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 TNFRSF12AQ9NP84 129 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 GPRC5CQ9NQ84 441 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 ARHGEF4Q9NR80 690 aa8.81□□□□□ -1
GTF3C3-211ENST00000481098 SNRPB2P08579 225 aaKnown RBP8.8□□□□□ -1
GTF3C3-211ENST00000481098 ARL4AP40617 200 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 GRIA2P42262 883 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 TXKP42681 527 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 GALK1P51570 392 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 CYP4F8P98187 520 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 MESP2Q0VG99 397 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 MAP4K2Q12851 820 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 MLANAQ16655 118 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 SLC35F1Q5T1Q4 408 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 DEPDC7Q96QD5 511 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 DNAJC2Q99543 621 aaKnown RBP8.8□□□□□ -1
GTF3C3-211ENST00000481098 PDLIM7Q9NR12 457 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 CLEC1BQ9P126 229 aa8.8□□□□□ -1
GTF3C3-211ENST00000481098 MSL3P1P0C860 447 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 FGFR1P11362 822 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 SF1Q15637 639 aaKnown RBP8.79□□□□□ -1
GTF3C3-211ENST00000481098 MTERF2Q49AM1 385 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 MBLAC2Q68D91 279 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 IQCEQ6IPM2 695 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 SPATC1Q76KD6 591 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 TMEM145Q8NBT3 493 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 AARSD1Q9BTE6 412 aaKnown RBP8.79□□□□□ -1
GTF3C3-211ENST00000481098 EPB41L4BQ9H329 900 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 NSUN3Q9H649 340 aaKnown RBP8.79□□□□□ -1
GTF3C3-211ENST00000481098 ZNF552Q9H707 407 aaPredicted RBP8.79□□□□□ -1
GTF3C3-211ENST00000481098 SNTG2Q9NY99 539 aa8.79□□□□□ -1
GTF3C3-211ENST00000481098 SRGAP3O43295 1099 aa8.78□□□□□ -1
GTF3C3-211ENST00000481098 ADCY3O60266 1144 aa8.78□□□□□ -1
GTF3C3-211ENST00000481098 PEX10O60683 326 aa8.78□□□□□ -1
GTF3C3-211ENST00000481098 FARP2O94887 1054 aaPredicted RBP8.78□□□□□ -1
GTF3C3-211ENST00000481098 YBX1P67809 324 aaKnown RBP8.78□□□□□ -1
GTF3C3-211ENST00000481098 ADGRF1Q5T601 910 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms