RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 AP1ARQ63HQ0 302 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 CCT6BQ92526 530 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
SIK3-210ENST00000480468 NOD2Q9HC29 1040 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 CABP5Q9NP86 173 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 RBM12Q9NTZ6 932 aaKnown RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 VPS54Q9P1Q0 977 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 DENND2AQ9ULE3 1009 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 NFU1Q9UMS0 254 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 RGPD2P0DJD1 1756 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 LIN7AO14910 233 aaPredicted RBP11.81□□□□□ -0.52
SIK3-210ENST00000480468 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
SIK3-210ENST00000480468 GLI1P08151 1106 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 FAM153BP0C7A2 387 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 BYSLQ13895 437 aaKnown RBP11.81□□□□□ -0.52
SIK3-210ENST00000480468 ALX1Q15699 326 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 RTN1Q16799 776 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 CCDC96Q2M329 555 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 FAM153CQ494X1 144 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
SIK3-210ENST00000480468 NKX2-3Q8TAU0 364 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 CCDC42Q96M95 316 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 PPANQ9NQ55 473 aaKnown RBP11.81□□□□□ -0.52
SIK3-210ENST00000480468 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 FAM153AQ9UHL3 310 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
SIK3-210ENST00000480468 GRID2IPA4D2P6 1211 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 ZNF263O14978 683 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 PJA2O43164 708 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 PPIP5K2O43314 1243 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 HEXIM1O94992 359 aaKnown RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 SSBP05455 408 aaKnown RBP eCLIP11.8□□□□□ -0.52
SIK3-210ENST00000480468 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 MATR3P43243 847 aaKnown RBP eCLIP11.8□□□□□ -0.52
SIK3-210ENST00000480468 GKAP1Q5VSY0 366 aaPredicted RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 LMBR1Q8WVP7 490 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 HVCN1Q96D96 273 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 MYL10Q9BUA6 226 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 IFIH1Q9BYX4 1025 aaKnown RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 AGPAT5Q9NUQ2 364 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 MAGEC2Q9UBF1 373 aaPredicted RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 C15orf41Q9Y2V0 281 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 RIPOR2Q9Y4F9 1068 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 PCDHA13Q9Y5I0 950 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 IFIT3O14879 490 aaKnown RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 COBLO75128 1261 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
SIK3-210ENST00000480468 MYZAPP0CAP1 466 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 PRCPP42785 496 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 RWDD2BP57060 319 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 CYP27A1Q02318 531 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 AGBL2Q5U5Z8 902 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 EPB41L5Q9HCM4 733 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 ETAA1Q9NY74 926 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 PLAAQ9Y263 795 aa11.8□□□□□ -0.52
SIK3-210ENST00000480468 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 BUB1BO60566 1050 aaPredicted RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 QPCTQ16769 361 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 LRRC24Q50LG9 513 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 RNF10Q8N5U6 811 aaKnown RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 NSMCE1Q8WV22 266 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 SAAL1Q96ER3 474 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 TLR10Q9BXR5 811 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 TAF1DQ9H5J8 278 aaPredicted RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 CNNM2Q9H8M5 875 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 PLAGL2Q9UPG8 496 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 FRMD3A2A2Y4 597 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 CFAP73A6NFT4 308 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 H0YGN5 161 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 PES1O00541 588 aaKnown RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 MOCS3O95396 460 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 IBSPP21815 317 aaPredicted RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 ADD2P35612 726 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 GUCY2DQ02846 1103 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 ACCSLQ4AC99 568 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 BZW1Q7L1Q6 419 aaKnown RBP11.79□□□□□ -0.52
SIK3-210ENST00000480468 MAATS1Q7Z4T9 603 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 CASKIN2Q8WXE0 1202 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 SPDL1Q96EA4 605 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 ERGIC2Q96RQ1 377 aa11.79□□□□□ -0.52
SIK3-210ENST00000480468 MTRQ99707 1265 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms