RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 BPIFA3Q9BQP9 254 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 F5H6K3 240 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 CCNT1O60563 726 aaKnown RBP16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 MSNP26038 577 aaKnown RBP16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 LONP1P36776 959 aaKnown RBP16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 KLRC3Q07444 240 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 UBE2SQ16763 222 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 QRICH1Q2TAL8 776 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 FKBP1CQ5VVH2 108 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 NEK8Q86SG6 692 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 TBCKQ8TEA7 893 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 RIC8AQ9NPQ8 531 aa16.52■□□□□ 0.24
PKNOX1-206ENST00000480179 WNT10BO00744 389 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 AFMP43652 599 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 TNNI2P48788 182 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 DTHD1Q6ZMT9 781 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 PLA2G4DQ86XP0 818 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-206ENST00000480179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.233e-6■■■■□ 21.7
PKNOX1-206ENST00000480179 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 NEMFO60524 1076 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 TXLNAP40222 546 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 SNAP25P60880 206 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 DRC7Q8IY82 874 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 CUL5Q93034 780 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 PAGE5Q96GU1 130 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 ARHGEF10LQ9HCE6 1279 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 ECE1P42892 770 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 VEGFBP49765 207 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 GMPSP49915 693 aaPredicted RBP16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 DEFB115Q30KQ5 88 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 SARM1Q6SZW1 724 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.5■□□□□ 0.23
PKNOX1-206ENST00000480179 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 LAD1O00515 517 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 SMC2O95347 1197 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 EGFRP00533 1210 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 BMP3P12645 472 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 CASP1P29466 404 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 CDC25AP30304 524 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 E2F4Q16254 413 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 IQUBQ8NA54 791 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 ZNF830Q96NB3 372 aaPredicted RBP16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 ABT1Q9ULW3 272 aaKnown RBP16.49■□□□□ 0.23
PKNOX1-206ENST00000480179 SMTNL1A8MU46 457 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 BMP6P22004 513 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 PRPHP41219 470 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 ZNF280AP59817 542 aaPredicted RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 TPM4P67936 248 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 KARSQ15046 597 aaKnown RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 PDXDC2PQ6P474 469 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 SH3RF1Q7Z6J0 888 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 POTEDQ86YR6 584 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 MICALL2Q8IY33 904 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 STAMQ92783 540 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 ATAD5Q96QE3 1844 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 SARSP49591 514 aaKnown RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 MORC3Q14149 939 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 NCAPHQ15003 741 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 NT5DC1Q5TFE4 455 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 USP50Q70EL3 339 aaPredicted RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 PSTPIP2Q9H939 334 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
PKNOX1-206ENST00000480179 MYH7BA7E2Y1 1941 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 RASSF10A6NK89 507 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 TBC1D12O60347 775 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 TDP2O95551 362 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 CLCN1P35523 988 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 STAT6P42226 847 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 EPS15P42566 896 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 RASA3Q14644 834 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 KIAA1755Q5JYT7 1200 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 GOPCQ9HD26 462 aa16.47■□□□□ 0.23
PKNOX1-206ENST00000480179 PGAP2Q9UHJ9 254 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms